RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 EIF4HQ15056 248 aaKnown RBP12.66□□□□□ -0.38
CLK3-206ENST00000562078 COL13A1Q5TAT6 717 aaPredicted RBP12.66□□□□□ -0.38
CLK3-206ENST00000562078 BCL2L15Q5TBC7 163 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 DDI2Q5TDH0 399 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 RASSF6Q6ZTQ3 369 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 TPGS1Q6ZTW0 290 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 RBFAQ8N0V3 343 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 SMG7Q92540 1137 aaKnown RBP12.66□□□□□ -0.38
CLK3-206ENST00000562078 MSLNLQ96KJ4 702 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 ESRP2Q9H6T0 727 aaKnown RBP12.66□□□□□ -0.38
CLK3-206ENST00000562078 REEP1Q9H902 201 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 LYARQ9NX58 379 aaKnown RBP12.66□□□□□ -0.38
CLK3-206ENST00000562078 MAB21L2Q9Y586 359 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 PLXNB3Q9ULL4 1909 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 TCRBV16S1A1N1A0A5B0 115 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 FAM220BPB1ANY3 271 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 HCN1O60741 890 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 CBX7O95931 251 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 GABRB1P18505 474 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 PSMA3P25788 255 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 PBX2P40425 430 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 GZMMP51124 257 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 BLVRAP53004 296 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 NR6A1Q15406 480 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 HSD17B12Q53GQ0 312 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.66□□□□□ -0.38
CLK3-206ENST00000562078 MILR1Q7Z6M3 343 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 CCDC36Q8IYA8 594 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 LIX1Q8N485 282 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 OR52B6Q8NGF0 335 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 UCN3Q969E3 161 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 CXorf58Q96LI9 332 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 SAMD11Q96NU1 681 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 PITHD1Q9GZP4 211 aaPredicted RBP12.66□□□□□ -0.38
CLK3-206ENST00000562078 ADAM30Q9UKF2 790 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 CLEC4EQ9ULY5 219 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 YBX2Q9Y2T7 364 aaKnown RBP12.66□□□□□ -0.38
CLK3-206ENST00000562078 STON1Q9Y6Q2 735 aa12.66□□□□□ -0.38
CLK3-206ENST00000562078 TRANK1O15050 2925 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 A0A1W2PRU2 124 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 NPEPPSL1A6NEC2 478 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 CDC7O00311 574 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 PRAMEF1O95521 474 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 HLA-DQB1P01920 261 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 C1QCP02747 245 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 C9P02748 559 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 RPS17P08708 135 aaKnown RBP12.65□□□□□ -0.38
CLK3-206ENST00000562078 CHRM5P08912 532 aaPredicted RBP12.65□□□□□ -0.38
CLK3-206ENST00000562078 AKT1P31749 480 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 TTPAP49638 278 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 HSF2Q03933 536 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 ZNF91Q05481 1191 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 CAMK1Q14012 370 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 TSNQ15631 228 aaKnown RBP12.65□□□□□ -0.38
CLK3-206ENST00000562078 AP5B1Q2VPB7 878 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 CORO6Q6QEF8 472 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 IL27RAQ6UWB1 636 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 OVCH2Q7RTZ1 564 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 KANSL1Q7Z3B3 1105 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 CALHM3Q86XJ0 350 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 ZZZ3Q8IYH5 903 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 PGBD3Q8N328 593 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 KRTCAP2Q8N6L1 136 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 SIDT2Q8NBJ9 832 aaKnown RBP12.65□□□□□ -0.38
CLK3-206ENST00000562078 KCT2Q8NC54 265 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 RHEBL1Q8TAI7 183 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 CDCA4Q9BXL8 241 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 SLC29A3Q9BZD2 475 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 GPR63Q9BZJ6 419 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 DERL2Q9GZP9 239 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 SMG9Q9H0W8 520 aaKnown RBP12.65□□□□□ -0.38
CLK3-206ENST00000562078 TFB2MQ9H5Q4 396 aaKnown RBP12.65□□□□□ -0.38
CLK3-206ENST00000562078 TMEM184CQ9NVA4 438 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 CDH23Q9H251 3354 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 KERAO60938 352 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 ECI2O75521 394 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 B3GALT4O96024 378 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 SCG5P05408 212 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 PSMA1P25786 263 aaKnown RBP12.65□□□□□ -0.38
CLK3-206ENST00000562078 GKP32189 559 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 CAV3P56539 151 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 CTSL3PQ5NE16 218 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 TMEM107Q6UX40 140 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 ZNF551Q7Z340 670 aaPredicted RBP12.65□□□□□ -0.38
CLK3-206ENST00000562078 KIAA1191Q96A73 305 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 EID2BQ96D98 161 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 PIP5K1AQ99755 562 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 CLEC2DQ9UHP7 191 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 GLS2Q9UI32 602 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 PCTPQ9UKL6 214 aa12.65□□□□□ -0.38
CLK3-206ENST00000562078 PPIEQ9UNP9 301 aaKnown RBP12.65□□□□□ -0.38
CLK3-206ENST00000562078 SAMD4AQ9UPU9 718 aaKnown RBP12.65□□□□□ -0.38
CLK3-206ENST00000562078 DNASE2O00115 360 aaPredicted RBP12.64□□□□□ -0.39
CLK3-206ENST00000562078 BTN3A1O00481 513 aa12.64□□□□□ -0.39
CLK3-206ENST00000562078 LZTS3O60299 673 aaPredicted RBP12.64□□□□□ -0.39
CLK3-206ENST00000562078 HPGDSO60760 199 aa12.64□□□□□ -0.39
CLK3-206ENST00000562078 PKMP14618 531 aaKnown RBP12.64□□□□□ -0.39
CLK3-206ENST00000562078 EPCAMP16422 314 aa12.64□□□□□ -0.39
CLK3-206ENST00000562078 AP1S1P61966 158 aa12.64□□□□□ -0.39
CLK3-206ENST00000562078 CSTF1Q05048 431 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms