RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 EXOC1LA0A1B0GW35 172 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 A0A1W2PS29 197 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 C19orf84I3L1E1 186 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 SEMA3DO95025 777 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 CLDN14O95500 239 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 NADKO95544 446 aaPredicted RBP9.5□□□□□ -0.89
CLK3-205ENST00000561673 CLPSP04118 112 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 P04436 131 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 TPOP07202 933 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 SNRPB2P08579 225 aaKnown RBP9.5□□□□□ -0.89
CLK3-205ENST00000561673 RPS17P08708 135 aaKnown RBP9.5□□□□□ -0.89
CLK3-205ENST00000561673 SLC35E2P0CK97 266 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 CCL3P10147 92 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 CDH13P55290 713 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 SLC37A1P57057 533 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 FOXO1Q12778 655 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 IFT88Q13099 833 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 SPRED3Q2MJR0 410 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 GGTA1PQ4G0N0 100 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 SGO1Q5FBB7 561 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 NDUFAF5Q5TEU4 345 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 FAM219BQ5XKK7 198 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 LETMD1Q6P1Q0 360 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 ARHGAP11AQ6P4F7 1023 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 LYPD8Q6UX82 237 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 TIFABQ6ZNK6 161 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 RGS9BPQ6ZS82 235 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 FAM47EQ6ZV65 393 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 SLC22A16Q86VW1 577 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 NUDT13Q86X67 352 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 MARVELD2Q8N4S9 558 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 SLC15A4Q8N697 577 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 KIF18AQ8NI77 898 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 ZNF483Q8TF39 744 aaPredicted RBP9.5□□□□□ -0.89
CLK3-205ENST00000561673 PHF10Q8WUB8 498 aaKnown RBP9.5□□□□□ -0.89
CLK3-205ENST00000561673 ART5Q96L15 291 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 PELOQ9BRX2 385 aaKnown RBP9.5□□□□□ -0.89
CLK3-205ENST00000561673 MRPL1Q9BYD6 325 aaKnown RBP9.5□□□□□ -0.89
CLK3-205ENST00000561673 RUBCNLQ9H714 662 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 WDR41Q9HAD4 459 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 FARSBQ9NSD9 589 aaKnown RBP9.5□□□□□ -0.89
CLK3-205ENST00000561673 SACM1LQ9NTJ5 587 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 TEX10Q9NXF1 929 aaPredicted RBP9.5□□□□□ -0.89
CLK3-205ENST00000561673 ADAM29Q9UKF5 820 aa9.5□□□□□ -0.89
CLK3-205ENST00000561673 MYO9AB2RTY4 2548 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 A8MT66 165 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 NPIPA2E9PIF3 369 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 NPIPA3F8WFD2 350 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 KIF2AO00139 706 aaPredicted RBP9.49□□□□□ -0.89
CLK3-205ENST00000561673 ACOT7O00154 380 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 OTCP00480 354 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 PDYNP01213 254 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 ABHD2P08910 425 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 TSPAN8P19075 237 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 PIK3R1P27986 724 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 GALNSP34059 522 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 HSD17B3P37058 310 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 PIGAP37287 484 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 MAGEA5P43359 124 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 KIR3DL1P43629 444 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 DNASE1L1P49184 302 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 GXYLT1Q4G148 440 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 EMC4Q5J8M3 183 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 TEX35Q5T0J7 233 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 CCNYL2Q5T2Q4 361 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 C10orf62Q5T681 223 aaPredicted RBP9.49□□□□□ -0.89
CLK3-205ENST00000561673 LGSNQ5TDP6 509 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 SLC22A10Q63ZE4 541 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 OR52E8Q6IFG1 317 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 PAOXQ6QHF9 649 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 ADGRD1Q6QNK2 874 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 RNF111Q6ZNA4 994 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 GK5Q6ZS86 529 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 TRMT10CQ7L0Y3 403 aaKnown RBP9.49□□□□□ -0.89
CLK3-205ENST00000561673 SLC29A4Q7RTT9 530 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 IFT20Q8IY31 132 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 EID3Q8N140 333 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 METTL4Q8N3J2 472 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 TMEM251Q8N6I4 163 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 CEP112Q8N8E3 955 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 SLC22A8Q8TCC7 542 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 PAQR8Q8TEZ7 354 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 C1QTNF3Q9BXJ4 246 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 WWTR1Q9GZV5 400 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 ELOVL6Q9H5J4 265 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 CXorf21Q9HAI6 301 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 IL1RL2Q9HB29 575 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.49□□□□□ -0.89
CLK3-205ENST00000561673 TUBA8Q9NY65 449 aaPredicted RBP9.49□□□□□ -0.89
CLK3-205ENST00000561673 AHSPQ9NZD4 102 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 ZNF225Q9UK10 706 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 SLC12A4Q9UP95 1085 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 OTOGQ6ZRI0 2925 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 PDZD2O15018 2839 aa9.49□□□□□ -0.89
CLK3-205ENST00000561673 A0A1B0GVC2 190 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 ATP6AP2A0A1C7CYW4 349 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 OR6C76A6NM76 312 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 RIPK2O43353 540 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 ATP6AP2O75787 350 aa9.48□□□□□ -0.89
CLK3-205ENST00000561673 IGHG3P01860 377 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms