RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 SOX3P41225 446 aa14.34□□□□□ -0.11
CCDC113-203ENST00000561517 HTR6P50406 440 aa14.34□□□□□ -0.11
CCDC113-203ENST00000561517 NAGLUP54802 743 aa14.34□□□□□ -0.11
CCDC113-203ENST00000561517 TRA2BP62995 288 aaKnown RBP14.34□□□□□ -0.11
CCDC113-203ENST00000561517 ERVK-8P63133 956 aa14.34□□□□□ -0.11
CCDC113-203ENST00000561517 ZNF267Q14586 743 aaPredicted RBP14.34□□□□□ -0.11
CCDC113-203ENST00000561517 PIGGQ5H8A4 983 aa14.34□□□□□ -0.11
CCDC113-203ENST00000561517 RNFT1Q5M7Z0 435 aa14.34□□□□□ -0.11
CCDC113-203ENST00000561517 FRMD7Q6ZUT3 714 aa14.34□□□□□ -0.11
CCDC113-203ENST00000561517 SULF2Q8IWU5 870 aa14.34□□□□□ -0.11
CCDC113-203ENST00000561517 C4orf33Q8N1A6 199 aa14.34□□□□□ -0.11
CCDC113-203ENST00000561517 CPSF7Q8N684 471 aaKnown RBP14.34□□□□□ -0.11
CCDC113-203ENST00000561517 POGLUT1Q8NBL1 392 aa14.34□□□□□ -0.11
CCDC113-203ENST00000561517 OR4K14Q8NGD5 310 aa14.34□□□□□ -0.11
CCDC113-203ENST00000561517 RIT1Q92963 219 aa14.34□□□□□ -0.11
CCDC113-203ENST00000561517 CAVIN3Q969G5 261 aa14.34□□□□□ -0.11
CCDC113-203ENST00000561517 RELTQ969Z4 430 aa14.34□□□□□ -0.11
CCDC113-203ENST00000561517 TM4SF18Q96CE8 201 aa14.34□□□□□ -0.11
CCDC113-203ENST00000561517 ACPTQ9BZG2 426 aa14.34□□□□□ -0.11
CCDC113-203ENST00000561517 C12orf65Q9H3J6 166 aaKnown RBP14.34□□□□□ -0.11
CCDC113-203ENST00000561517 MID1IP1Q9NPA3 183 aa14.34□□□□□ -0.11
CCDC113-203ENST00000561517 TIMMDC1Q9NPL8 285 aa14.34□□□□□ -0.11
CCDC113-203ENST00000561517 RYDENQ9NUL5 291 aaKnown RBP14.34□□□□□ -0.11
CCDC113-203ENST00000561517 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.34□□□□□ -0.11
CCDC113-203ENST00000561517 OXSMQ9NWU1 459 aa14.34□□□□□ -0.11
CCDC113-203ENST00000561517 MKS1Q9NXB0 559 aa14.34□□□□□ -0.11
CCDC113-203ENST00000561517 LGALS13Q9UHV8 139 aa14.34□□□□□ -0.11
CCDC113-203ENST00000561517 MCM8Q9UJA3 840 aa14.34□□□□□ -0.11
CCDC113-203ENST00000561517 ERVK-11Q9UQG0 969 aa14.34□□□□□ -0.11
CCDC113-203ENST00000561517 ERVK-19Q9WJR5 959 aa14.34□□□□□ -0.11
CCDC113-203ENST00000561517 A0A1B0GUH1 482 aa14.33□□□□□ -0.12
CCDC113-203ENST00000561517 CCDC151A5D8V7 595 aa14.33□□□□□ -0.12
CCDC113-203ENST00000561517 KLRC4-KLRK1H3BQV0 150 aa14.33□□□□□ -0.12
CCDC113-203ENST00000561517 LRRTM2O43300 516 aa14.33□□□□□ -0.12
CCDC113-203ENST00000561517 PEX1O43933 1283 aa14.33□□□□□ -0.12
CCDC113-203ENST00000561517 CLPSP04118 112 aa14.33□□□□□ -0.12
CCDC113-203ENST00000561517 ZNF24P17028 368 aa14.33□□□□□ -0.12
CCDC113-203ENST00000561517 MEOX1P50221 254 aa14.33□□□□□ -0.12
CCDC113-203ENST00000561517 XKP51811 444 aa14.33□□□□□ -0.12
CCDC113-203ENST00000561517 SLC37A1P57057 533 aa14.33□□□□□ -0.12
CCDC113-203ENST00000561517 ASPHQ12797 758 aa14.33□□□□□ -0.12
CCDC113-203ENST00000561517 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.33□□□□□ -0.12
CCDC113-203ENST00000561517 SLC48A1Q6P1K1 146 aa14.33□□□□□ -0.12
CCDC113-203ENST00000561517 OPN5Q6U736 354 aa14.33□□□□□ -0.12
CCDC113-203ENST00000561517 IL20RBQ6UXL0 311 aa14.33□□□□□ -0.12
CCDC113-203ENST00000561517 TRABD2AQ86V40 505 aa14.33□□□□□ -0.12
CCDC113-203ENST00000561517 ZFP62Q8NB50 900 aaPredicted RBP14.33□□□□□ -0.12
CCDC113-203ENST00000561517 PSD4Q8NDX1 1056 aa14.33□□□□□ -0.12
CCDC113-203ENST00000561517 DOK4Q8TEW6 326 aa14.33□□□□□ -0.12
CCDC113-203ENST00000561517 SREK1Q8WXA9 508 aaKnown RBP14.33□□□□□ -0.12
CCDC113-203ENST00000561517 C11orf24Q96F05 449 aaPredicted RBP14.33□□□□□ -0.12
CCDC113-203ENST00000561517 KCNA7Q96RP8 456 aa14.33□□□□□ -0.12
CCDC113-203ENST00000561517 CNPPD1Q9BV87 410 aa14.33□□□□□ -0.12
CCDC113-203ENST00000561517 ROPN1BQ9BZX4 212 aaPredicted RBP14.33□□□□□ -0.12
CCDC113-203ENST00000561517 CXorf21Q9HAI6 301 aa14.33□□□□□ -0.12
CCDC113-203ENST00000561517 ROPN1Q9HAT0 212 aaPredicted RBP14.33□□□□□ -0.12
CCDC113-203ENST00000561517 MID2Q9UJV3 735 aa14.33□□□□□ -0.12
CCDC113-203ENST00000561517 PLLPQ9Y342 182 aa14.33□□□□□ -0.12
CCDC113-203ENST00000561517 TIMM22Q9Y584 194 aa14.33□□□□□ -0.12
CCDC113-203ENST00000561517 CACNA1DQ01668 2161 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 CACNA1CQ13936 2221 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 OR6C76A6NM76 312 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 ESPNB1AK53 854 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 NPIPA5E9PKD4 350 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 ASNA1O43681 348 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 NADKO95544 446 aaPredicted RBP14.32□□□□□ -0.12
CCDC113-203ENST00000561517 CPMP14384 443 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 PORP16435 677 aaPredicted RBP14.32□□□□□ -0.12
CCDC113-203ENST00000561517 FOXA1P55317 472 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 RAE1P78406 368 aaKnown RBP14.32□□□□□ -0.12
CCDC113-203ENST00000561517 RBPJQ06330 500 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 FUT7Q11130 342 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 SPIN4Q56A73 249 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 CFAP157Q5JU67 520 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 LIPMQ5VYY2 423 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 LYPD8Q6UX82 237 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 RNF111Q6ZNA4 994 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 RTL4Q6ZR62 310 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 GALNT12Q8IXK2 581 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 MMP21Q8N119 569 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 SLC15A4Q8N697 577 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 BANPQ8N9N5 519 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 CCDC63Q8NA47 563 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 GOLM1Q8NBJ4 401 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 C16orf52Q8NHV5 167 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 SGCZQ96LD1 299 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 FAIM2Q9BWQ8 316 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 TSPAN10Q9H1Z9 355 aaPredicted RBP14.32□□□□□ -0.12
CCDC113-203ENST00000561517 DEPPQ9NTK1 212 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 SIRT5Q9NXA8 310 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 PLEKHB1Q9UF11 243 aaPredicted RBP14.32□□□□□ -0.12
CCDC113-203ENST00000561517 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.32□□□□□ -0.12
CCDC113-203ENST00000561517 NPIPA1Q9UND3 350 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 ZNF835Q9Y2P0 537 aa14.32□□□□□ -0.12
CCDC113-203ENST00000561517 V9GYY5 206 aaPredicted RBP14.32□□□□□ -0.12
CCDC113-203ENST00000561517 CT62P0C5K7 136 aa14.31□□□□□ -0.12
CCDC113-203ENST00000561517 CA7P43166 264 aa14.31□□□□□ -0.12
CCDC113-203ENST00000561517 PER3P56645 1201 aa14.31□□□□□ -0.12
CCDC113-203ENST00000561517 HMGCS1Q01581 520 aa14.31□□□□□ -0.12
CCDC113-203ENST00000561517 ACSM2AQ08AH3 577 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms