RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 FHL5Q5TD97 284 aa8.78□□□□□ -1
HERC1-206ENST00000559996 TMEM164Q5U3C3 297 aa8.78□□□□□ -1
HERC1-206ENST00000559996 MLIPQ5VWP3 458 aa8.78□□□□□ -1
HERC1-206ENST00000559996 OR52E8Q6IFG1 317 aa8.78□□□□□ -1
HERC1-206ENST00000559996 MSANTD1Q6ZTZ1 278 aa8.78□□□□□ -1
HERC1-206ENST00000559996 ANKRD46Q86W74 232 aa8.78□□□□□ -1
HERC1-206ENST00000559996 PRSS58Q8IYP2 241 aa8.78□□□□□ -1
HERC1-206ENST00000559996 NLGN4XQ8N0W4 816 aa8.78□□□□□ -1
HERC1-206ENST00000559996 NLGN4YQ8NFZ3 816 aaPredicted RBP8.78□□□□□ -1
HERC1-206ENST00000559996 ADAMTS18Q8TE60 1221 aa8.78□□□□□ -1
HERC1-206ENST00000559996 PTPMT1Q8WUK0 201 aaPredicted RBP8.78□□□□□ -1
HERC1-206ENST00000559996 MR1Q95460 341 aa8.78□□□□□ -1
HERC1-206ENST00000559996 PPWD1Q96BP3 646 aaKnown RBP8.78□□□□□ -1
HERC1-206ENST00000559996 PTCHD1Q96NR3 888 aa8.78□□□□□ -1
HERC1-206ENST00000559996 OR52E6Q96RD3 313 aa8.78□□□□□ -1
HERC1-206ENST00000559996 NPAS2Q99743 824 aa8.78□□□□□ -1
HERC1-206ENST00000559996 WDR77Q9BQA1 342 aaPredicted RBP8.78□□□□□ -1
HERC1-206ENST00000559996 SLC25A23Q9BV35 468 aa8.78□□□□□ -1
HERC1-206ENST00000559996 YIPF2Q9BWQ6 316 aa8.78□□□□□ -1
HERC1-206ENST00000559996 ALOXE3Q9BYJ1 711 aa8.78□□□□□ -1
HERC1-206ENST00000559996 SOX17Q9H6I2 414 aaPredicted RBP8.78□□□□□ -1
HERC1-206ENST00000559996 EPS8L2Q9H6S3 715 aa8.78□□□□□ -1
HERC1-206ENST00000559996 WDR54Q9H977 334 aa8.78□□□□□ -1
HERC1-206ENST00000559996 ACSS1Q9NUB1 689 aaPredicted RBP8.78□□□□□ -1
HERC1-206ENST00000559996 MRGBPQ9NV56 204 aa8.78□□□□□ -1
HERC1-206ENST00000559996 GPATCH2Q9NW75 528 aa8.78□□□□□ -1
HERC1-206ENST00000559996 FAM120CQ9NX05 1096 aaKnown RBP8.78□□□□□ -1
HERC1-206ENST00000559996 TAGLN3Q9UI15 199 aa8.78□□□□□ -1
HERC1-206ENST00000559996 MKL2Q9ULH7 1088 aa8.78□□□□□ -1
HERC1-206ENST00000559996 MAPRE3Q9UPY8 281 aa8.78□□□□□ -1
HERC1-206ENST00000559996 MSRB2Q9Y3D2 182 aa8.78□□□□□ -1
HERC1-206ENST00000559996 MMACHCQ9Y4U1 282 aa8.78□□□□□ -1
HERC1-206ENST00000559996 PCDHB14Q9Y5E9 798 aa8.78□□□□□ -1
HERC1-206ENST00000559996 AHCTF1Q8WYP5 2266 aa8.78□□□□□ -1
HERC1-206ENST00000559996 LOC102723996A0A087X1L8 192 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 A0A1W2PRB8 838 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 IDSB3KWA1 339 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 HRKO00198 91 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 CLDN4O14493 209 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 CFLARO15519 480 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 PDPK1O15530 556 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 C6orf47O95873 294 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 PORP16435 677 aaPredicted RBP8.77□□□□□ -1.01
HERC1-206ENST00000559996 CSNK2A2P19784 350 aaPredicted RBP8.77□□□□□ -1.01
HERC1-206ENST00000559996 CD82P27701 267 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 RBMS1P29558 406 aaKnown RBP8.77□□□□□ -1.01
HERC1-206ENST00000559996 GALNSP34059 522 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 HPCAL1P37235 193 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 CPA2P48052 419 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 CDK9P50750 372 aaKnown RBP8.77□□□□□ -1.01
HERC1-206ENST00000559996 MVDP53602 400 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 KCNK10P57789 538 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 RPS18P62269 152 aaKnown RBP8.77□□□□□ -1.01
HERC1-206ENST00000559996 PLIN5Q00G26 463 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 OCA2Q04671 838 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 MAP4K2Q12851 820 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 SRSF6Q13247 344 aaKnown RBP8.77□□□□□ -1.01
HERC1-206ENST00000559996 NCF4Q15080 339 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 LTB4RQ15722 352 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 TRMT12Q53H54 448 aaKnown RBP8.77□□□□□ -1.01
HERC1-206ENST00000559996 ZNF628Q5EBL2 1059 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 COQ5Q5HYK3 327 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 EXOSC6Q5RKV6 272 aaKnown RBP8.77□□□□□ -1.01
HERC1-206ENST00000559996 REP15Q6BDI9 236 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 FAM111BQ6SJ93 734 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 RINLQ6ZS11 566 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 LANCL3Q6ZV70 420 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 GPR155Q7Z3F1 870 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 ESX1Q8N693 406 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 ENDOVQ8N8Q3 282 aaKnown RBP8.77□□□□□ -1.01
HERC1-206ENST00000559996 NFAM1Q8NET5 270 aaPredicted RBP8.77□□□□□ -1.01
HERC1-206ENST00000559996 OR2Y1Q8NGV0 311 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 DOK4Q8TEW6 326 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 OR5P2Q8WZ92 322 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 STARD8Q92502 1023 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 KLHL29Q96CT2 875 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 RCN3Q96D15 328 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 CMTM5Q96DZ9 223 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 ZBTB18Q99592 522 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 PRPF18Q99633 342 aaKnown RBP8.77□□□□□ -1.01
HERC1-206ENST00000559996 GPATCH1Q9BRR8 931 aaKnown RBP8.77□□□□□ -1.01
HERC1-206ENST00000559996 CXorf36Q9H7Y0 433 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 ANKRA2Q9H9E1 313 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 WDR41Q9HAD4 459 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 MIEF1Q9NQG6 463 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 C14orf105Q9NVL8 296 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 TAS2R1Q9NYW7 299 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 VAPAQ9P0L0 249 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 NTMQ9P121 344 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 IL17BQ9UHF5 180 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 CROTQ9UKG9 612 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 FARSAQ9Y285 508 aaKnown RBP8.77□□□□□ -1.01
HERC1-206ENST00000559996 NDUFAF1Q9Y375 327 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 PCDHGA6Q9Y5G7 932 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 MRPS18BQ9Y676 258 aaKnown RBP8.77□□□□□ -1.01
HERC1-206ENST00000559996 GMEB1Q9Y692 573 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 SPTBN2O15020 2390 aa8.77□□□□□ -1.01
HERC1-206ENST00000559996 AKAP13Q12802 2813 aa8.76□□□□□ -1.01
HERC1-206ENST00000559996 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.76□□□□□ -1.01
HERC1-206ENST00000559996 A0A1W2PQ72 361 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms