RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 ZC3HAV1LQ96H79 300 aaKnown RBP3.08□□□□□ -1.92
HERC1-203ENST00000558532 CPB2Q96IY4 423 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 WDFY2Q96P53 400 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 RAD9AQ99638 391 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 RBM4BQ9BQ04 359 aaKnown RBP3.08□□□□□ -1.92
HERC1-203ENST00000558532 C17orf62Q9BQA9 187 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 ABHD14AQ9BUJ0 271 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 SNRNP25Q9BV90 132 aaKnown RBP3.08□□□□□ -1.92
HERC1-203ENST00000558532 RBM4Q9BWF3 364 aaKnown RBP3.08□□□□□ -1.92
HERC1-203ENST00000558532 IDI2Q9BXS1 227 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 CALN1Q9BXU9 219 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 DGCR6LQ9BY27 220 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 KRTAP9-8Q9BYQ0 159 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 ING2Q9H160 280 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 DCSTAMPQ9H295 470 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 MAGIXQ9H6Y5 334 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 SYNDIG1Q9H7V2 258 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 IL21RQ9HBE5 538 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 C3orf14Q9HBI5 128 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 ZNF304Q9HCX3 659 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 TXNRD2Q9NNW7 524 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 ACOT13Q9NPJ3 140 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 C12orf4Q9NQ89 552 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 CHRAC1Q9NRG0 131 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 ABCB10Q9NRK6 738 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 PLSCR3Q9NRY6 295 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 THSD1Q9NS62 852 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 CISHQ9NSE2 258 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 PLCXD1Q9NUJ7 323 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 PAQR5Q9NXK6 330 aaPredicted RBP3.08□□□□□ -1.92
HERC1-203ENST00000558532 MAP3K20Q9NYL2 800 aaKnown RBP3.08□□□□□ -1.92
HERC1-203ENST00000558532 TAS2R9Q9NYW1 312 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 TAS2R7Q9NYW3 318 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 IL37Q9NZH6 218 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 DNAJB9Q9UBS3 223 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 WARS2Q9UGM6 360 aaKnown RBP3.08□□□□□ -1.92
HERC1-203ENST00000558532 C3orf18Q9UK00 162 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 CPSF3Q9UKF6 684 aaKnown RBP3.08□□□□□ -1.92
HERC1-203ENST00000558532 ELF5Q9UKW6 265 aaPredicted RBP3.08□□□□□ -1.92
HERC1-203ENST00000558532 VANGL2Q9ULK5 521 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 DAPP1Q9UN19 280 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 AURKCQ9UQB9 309 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 AP3M1Q9Y2T2 418 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 NEUROG3Q9Y4Z2 214 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 LYVE1Q9Y5Y7 322 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 RNF215Q9Y6U7 377 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 MYLKQ15746 1914 aa3.08□□□□□ -1.92
HERC1-203ENST00000558532 TRIP12Q14669 1992 aaPredicted RBP3.08□□□□□ -1.92
HERC1-203ENST00000558532 BTAF1O14981 1849 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 PDCD11Q14690 1871 aaKnown RBP3.07□□□□□ -1.92
HERC1-203ENST00000558532 PLXNA1Q9UIW2 1896 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 ANKRD36A6QL64 1941 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 PCM1Q15154 2024 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 A0A0B4J293 547 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 A0A0J9YYE9 177 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 A0A0U1RQS6 177 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 RPS10-NUDT3A0A1W2PQS6 291 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 CLRN2A0PK11 232 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 MEIOCA2RUB1 952 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 ASPDHA6ND91 283 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 MBD3L5A6NJ08 208 aaPredicted RBP3.07□□□□□ -1.92
HERC1-203ENST00000558532 A8MT66 165 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 C12orf71A8MTZ7 269 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 SSX4O60224 188 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 CACNG3O60359 315 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 DPM1O60762 260 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 SEC22BO75396 215 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 TSPAN9O75954 239 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 ANGPTL1O95841 491 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 TSPAN12O95859 305 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 WDPCPO95876 746 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 PGK1P00558 417 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 FTH1P02794 183 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 MT-ND2P03891 347 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 SERPINF2P08697 491 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 RBP1P09455 135 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 ERVK-10P10266 1014 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 DDX5P17844 614 aaKnown RBP3.07□□□□□ -1.92
HERC1-203ENST00000558532 TNNI1P19237 187 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 GGT1P19440 569 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 CYP2F1P24903 491 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 HOXA13P31271 388 aaPredicted RBP3.07□□□□□ -1.92
HERC1-203ENST00000558532 GRK5P34947 590 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 SERPINF1P36955 418 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 HNF4AP41235 474 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 CBX5P45973 191 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 SLC15A1P46059 708 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 PPP3CCP48454 512 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 NRIP1P48552 1158 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 SLC9A3P48764 834 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 RPL34P49207 117 aaKnown RBP3.07□□□□□ -1.92
HERC1-203ENST00000558532 RGS7P49802 495 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 RAB10P61026 200 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 VBP1P61758 197 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 CSNK2BP67870 215 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 GBE1Q04446 702 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 EMX2Q04743 252 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 SMARCB1Q12824 385 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 TRAF3Q13114 568 aa3.07□□□□□ -1.92
HERC1-203ENST00000558532 SLAMF1Q13291 335 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms