RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 CASP2P42575 452 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 MAGEA5P43359 124 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 KIR2DL3P43628 341 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 HNRNPFP52597 415 aaKnown RBP7.99□□□□□ -1.13
VRK1-206ENST00000557222 PLA2G16P53816 162 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 DLX5P56178 289 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 IGLV3-21P80748 117 aaPredicted RBP7.99□□□□□ -1.13
VRK1-206ENST00000557222 MGAT5Q09328 741 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 E2F2Q14209 437 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 SF3B4Q15427 424 aaKnown RBP eCLIP7.99□□□□□ -1.133e-7■■■■□ 20.7
VRK1-206ENST00000557222 TBCCQ15814 346 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 HSPB2Q16082 182 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 ZNF750Q32MQ0 723 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 ZNF791Q3KP31 576 aaPredicted RBP7.99□□□□□ -1.13
VRK1-206ENST00000557222 FBXL19-AS1Q494R0 122 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 TMEM35AQ53FP2 167 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 PAGE2BQ5JRK9 111 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 C1orf185Q5T7R7 199 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 SLC22A10Q63ZE4 541 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 FAM47EQ6ZV65 393 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 SYDE1Q6ZW31 735 aaPredicted RBP7.99□□□□□ -1.13
VRK1-206ENST00000557222 FRA10AC1Q70Z53 315 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 CAMKMTQ7Z624 323 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 ZC3HC1Q86WB0 502 aaKnown RBP7.99□□□□□ -1.13
VRK1-206ENST00000557222 IGDCC3Q8IVU1 814 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 FBXW8Q8N3Y1 598 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 FAM47BQ8NA70 645 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 TMEM52Q8NDY8 209 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 OR5M9Q8NGP3 310 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 SLC2A12Q8TD20 617 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 PAQR8Q8TEZ7 354 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 FAM222BQ8WU58 562 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 CCT6BQ92526 530 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 PTCD3Q96EY7 689 aaKnown RBP7.99□□□□□ -1.13
VRK1-206ENST00000557222 ART5Q96L15 291 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 ALPK1Q96QP1 1244 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 POLDIP3Q9BY77 421 aaKnown RBP7.99□□□□□ -1.13
VRK1-206ENST00000557222 DERL2Q9GZP9 239 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 LDAHQ9H6V9 325 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 COPS7BQ9H9Q2 264 aaPredicted RBP7.99□□□□□ -1.13
VRK1-206ENST00000557222 SH2D2AQ9NP31 389 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 SSU72Q9NP77 194 aaKnown RBP7.99□□□□□ -1.13
VRK1-206ENST00000557222 PRDM7Q9NQW5 492 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 RASSF1Q9NS23 344 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 DNAJC11Q9NVH1 559 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.99□□□□□ -1.13
VRK1-206ENST00000557222 CNIH4Q9P003 139 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 COPS7AQ9UBW8 275 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 Q9UFV3 132 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 ASIC3Q9UHC3 531 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 ST6GALNAC2Q9UJ37 374 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 PPP2R2CQ9Y2T4 447 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 ATG4BQ9Y4P1 393 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 TEX264Q9Y6I9 313 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 SPACA6W5XKT8 324 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 MPDZO75970 2070 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 TRGV5A0A0B4J1U4 118 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 A0A0G2JMM0 328 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 A0A1W2PPB8 328 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 A0A1W2PRS3 328 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 ANKRD33BA6NCL7 494 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 NPEPPSL1A6NEC2 478 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 KIR3DP1A8MWS1 328 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 AHRRA9YTQ3 701 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 C17orf105B2RV13 164 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 SCELO95171 688 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 NADKO95544 446 aaPredicted RBP7.98□□□□□ -1.13
VRK1-206ENST00000557222 CELA3AP09093 270 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 TNNI3P19429 210 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 DNASE1P24855 282 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 ELK3P41970 407 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 GDF5P43026 501 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 ARFIP1P53367 373 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 TAS2R39P59534 338 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 PPP2R2AP63151 447 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 POU4F1Q01851 419 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 DAZAP2Q15038 168 aaPredicted RBP7.98□□□□□ -1.13
VRK1-206ENST00000557222 TGFBIQ15582 683 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 TSNQ15631 228 aaKnown RBP7.98□□□□□ -1.13
VRK1-206ENST00000557222 HIST2H2ACQ16777 129 aaPredicted RBP7.98□□□□□ -1.13
VRK1-206ENST00000557222 HIST2H2AA3Q6FI13 130 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 SULT1C3Q6IMI6 304 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 TRMT10BQ6PF06 316 aaKnown RBP7.98□□□□□ -1.13
VRK1-206ENST00000557222 C16orf47Q6ZP98 133 aaPredicted RBP7.98□□□□□ -1.13
VRK1-206ENST00000557222 LIX1LQ8IVB5 337 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 SLC22A8Q8TCC7 542 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 ZNF721Q8TF20 911 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 UBE2E3Q969T4 207 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 SENP5Q96HI0 755 aaPredicted RBP7.98□□□□□ -1.13
VRK1-206ENST00000557222 RUNDC3BQ96NL0 473 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 OSBPL9Q96SU4 736 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 CSF3RQ99062 836 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 KRTAP4-12Q9BQ66 201 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 MCMBPQ9BTE3 642 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 OR8D2Q9GZM6 311 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 RHOJQ9H4E5 214 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 LIN28AQ9H9Z2 209 aaKnown RBP7.98□□□□□ -1.13
VRK1-206ENST00000557222 CCM2LQ9NUG4 571 aaPredicted RBP7.98□□□□□ -1.13
VRK1-206ENST00000557222 MS4A12Q9NXJ0 267 aa7.98□□□□□ -1.13
VRK1-206ENST00000557222 TUBA8Q9NY65 449 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms