RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 IPMKQ8NFU5 416 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 OR13C4Q8NGS5 318 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 OR9A4Q8NGU2 314 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 LINC00476Q8WZB0 136 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 RAPGEF5Q92565 580 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 SLC9A6Q92581 669 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 SYN2Q92777 582 aaPredicted RBP4.32□□□□□ -1.72
SCFD1-223ENST00000557076 NTNG2Q96CW9 530 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 OR1F2PQ96R84 312 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 ERGIC2Q96RQ1 377 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 BEX2Q9BXY8 128 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 BRINP2Q9C0B6 783 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 HAUS4Q9H6D7 363 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 ARNT2Q9HBZ2 717 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 ACKR4Q9NPB9 350 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 LANCL2Q9NS86 450 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 TAB2Q9NYJ8 693 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 AIPL1Q9NZN9 384 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 DRG1Q9Y295 367 aaKnown RBP4.32□□□□□ -1.72
SCFD1-223ENST00000557076 PCDHA3Q9Y5H8 950 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 NFS1Q9Y697 457 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.32□□□□□ -1.72
SCFD1-223ENST00000557076 DSCAMO60469 2012 aa4.32□□□□□ -1.72
SCFD1-223ENST00000557076 CADP27708 2225 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 TRRAPQ9Y4A5 3859 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 IGKV1-8A0A0C4DH67 115 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 ATP6AP2A0A1C7CYW4 349 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 LRRD1A4D1F6 860 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 CD8B2A6NJW9 211 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 C3orf70A6NLC5 250 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-223ENST00000557076 A8MVJ9 347 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 DEFB108AA8MXU0 73 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 B5MCH6 92 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 APOL1O14791 398 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 ITGA10O75578 1167 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 ATP6AP2O75787 350 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 ANXA9O76027 345 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 C1orf105O95561 183 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 CYP1A2P05177 515 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 TPM2P07951 284 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 PSMA3P25788 255 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 PSMB5P28074 263 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 CCR7P32248 378 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 ADRA1AP35348 466 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 IDUAP35475 653 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 HSD17B2P37059 387 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 MAGEA5P43359 124 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 SSR4P51571 173 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 CLCN2P51788 898 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 PTTG1IPP53801 180 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 SEC24CP53992 1094 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 ELLP55199 621 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-223ENST00000557076 ADARP55265 1226 aaKnown RBP4.31□□□□□ -1.72
SCFD1-223ENST00000557076 ATP5J2P56134 94 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 KRTAP10-11P60412 298 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 HSPA14Q0VDF9 509 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 KRT31Q15323 416 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 CLEC12BQ2HXU8 276 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 TYSND1Q2T9J0 566 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 P3H1Q32P28 736 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 CCDC38Q502W7 563 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 LIPNQ5VXI9 398 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 NSUN5P2Q63ZY6 315 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 ABHD13Q7L211 337 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 SLC26A11Q86WA9 606 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 LACC1Q8IV20 430 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 ZNF567Q8N184 647 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 APCDD1LQ8NCL9 501 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 MAPK1IP1LQ8NDC0 245 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 CPEB3Q8NE35 698 aaKnown RBP4.31□□□□□ -1.72
SCFD1-223ENST00000557076 CFAP61Q8NHU2 1237 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 NEIL3Q8TAT5 605 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 MAGEC3Q8TD91 643 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 TFB1MQ8WVM0 346 aaKnown RBP4.31□□□□□ -1.72
SCFD1-223ENST00000557076 SMPDL3AQ92484 453 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 KIAA1191Q96A73 305 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 ZBED6CLQ96FA7 236 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-223ENST00000557076 CDKN2AIPNLQ96HQ2 116 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 SGCZQ96LD1 299 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 RBM24Q9BX46 236 aaKnown RBP4.31□□□□□ -1.72
SCFD1-223ENST00000557076 CARD6Q9BX69 1037 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 FSD1LQ9BXM9 530 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 FAM129AQ9BZQ8 928 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 CXorf56Q9H5V9 222 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 CALHM2Q9HA72 323 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 MRPS30Q9NP92 439 aaKnown RBP4.31□□□□□ -1.72
SCFD1-223ENST00000557076 HPF1Q9NWY4 346 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 QPCTLQ9NXS2 382 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 DDX56Q9NY93 547 aaKnown RBP4.31□□□□□ -1.72
SCFD1-223ENST00000557076 ZNF226Q9NYT6 803 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 C6orf203Q9P0P8 240 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-223ENST00000557076 LPAR3Q9UBY5 353 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 FEZ2Q9UHY8 353 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-223ENST00000557076 ANAPC7Q9UJX3 599 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 TRHDEQ9UKU6 1024 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 TTC7AQ9ULT0 858 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-223ENST00000557076 PPIEQ9UNP9 301 aaKnown RBP4.31□□□□□ -1.72
SCFD1-223ENST00000557076 ERVK-11Q9UQG0 969 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 AAR2Q9Y312 384 aaKnown RBP4.31□□□□□ -1.72
SCFD1-223ENST00000557076 LIPGQ9Y5X9 500 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms