RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 HMOX2P30519 316 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 PTGER1P34995 402 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 SNRPNP63162 240 aaKnown RBP7.2□□□□□ -1.26
ABCD4-220ENST00000553998 TGM3Q08188 693 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 CHI3L2Q15782 390 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 ARL13AQ5H913 290 aaPredicted RBP7.2□□□□□ -1.26
ABCD4-220ENST00000553998 EMC4Q5J8M3 183 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 ZNF468Q5VIY5 522 aaPredicted RBP7.2□□□□□ -1.26
ABCD4-220ENST00000553998 ATG16L1Q676U5 607 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 RNF165Q6ZSG1 346 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 LANCL3Q6ZV70 420 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 CHSY3Q70JA7 882 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 RPS27LQ71UM5 84 aaKnown RBP7.2□□□□□ -1.26
ABCD4-220ENST00000553998 VN1R5Q7Z5H4 357 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 CAMKMTQ7Z624 323 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 CD163Q86VB7 1156 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 CLYBLQ8N0X4 340 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 CPSF7Q8N684 471 aaKnown RBP7.2□□□□□ -1.26
ABCD4-220ENST00000553998 SLC5A8Q8N695 610 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 ARFGAP2Q8N6H7 521 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 CDYL2Q8N8U2 506 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 GBP7Q8N8V2 638 aaPredicted RBP7.2□□□□□ -1.26
ABCD4-220ENST00000553998 HUS1BQ8NHY5 278 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 METTL6Q8TCB7 284 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 ELP5Q8TE02 316 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 CCT6BQ92526 530 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 GAL3ST3Q96A11 431 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 ARSGQ96EG1 525 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 CMTM7Q96FZ5 175 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 CDK15Q96Q40 435 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 SERPINI1Q99574 410 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 PAIP2Q9BPZ3 127 aaKnown RBP7.2□□□□□ -1.26
ABCD4-220ENST00000553998 MS4A8Q9BY19 250 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 ROGDIQ9GZN7 287 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 REXO4Q9GZR2 422 aaKnown RBP7.2□□□□□ -1.26
ABCD4-220ENST00000553998 TP63Q9H3D4 680 aaPredicted RBP7.2□□□□□ -1.26
ABCD4-220ENST00000553998 LIME1Q9H400 295 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 ANKHQ9HCJ1 492 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 DMRT3Q9NQL9 472 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 NMRK1Q9NWW6 199 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 ANKRD10Q9NXR5 420 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 DNAJB12Q9NXW2 375 aaKnown RBP7.2□□□□□ -1.26
ABCD4-220ENST00000553998 LRFN1Q9P244 771 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.2□□□□□ -1.26
ABCD4-220ENST00000553998 L3MBTL1Q9Y468 752 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 FLNAP21333 2647 aaKnown RBP7.19□□□□□ -1.26
ABCD4-220ENST00000553998 ABCA4P78363 2273 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 WDR91A4D1P6 747 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 MANBAO00462 879 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 AZIN1O14977 448 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 ULK1O75385 1050 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 SEMA3DO95025 777 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 SCELO95171 688 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 TBX6O95947 436 aaPredicted RBP7.19□□□□□ -1.26
ABCD4-220ENST00000553998 CHEK2O96017 543 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 SERPIND1P05546 499 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 SMIM10L1P0DMW3 83 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 UROSP10746 265 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 BGNP21810 368 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 IL10P22301 178 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 AVPR1BP47901 424 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 DLX5P56178 289 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 ABCE1P61221 599 aaKnown RBP7.19□□□□□ -1.26
ABCD4-220ENST00000553998 MAT1AQ00266 395 aaKnown RBP7.19□□□□□ -1.26
ABCD4-220ENST00000553998 OC90Q02509 493 aaPredicted RBP7.19□□□□□ -1.26
ABCD4-220ENST00000553998 HYAL2Q12891 473 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 CSTF3Q12996 717 aaKnown RBP7.19□□□□□ -1.26
ABCD4-220ENST00000553998 STX3Q13277 289 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 CUL3Q13618 768 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 CEBPEQ15744 281 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 MAPKAPK3Q16644 382 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 CMPK2Q5EBM0 449 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 DEPDC1Q5TB30 811 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 KHDRBS2Q5VWX1 349 aaKnown RBP7.19□□□□□ -1.26
ABCD4-220ENST00000553998 TRIM40Q6P9F5 258 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 ABHD17CQ6PCB6 329 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 ZCCHC23Q6ZST2 131 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 ACAD11Q709F0 780 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 RPS19BP1Q86WX3 136 aaKnown RBP7.19□□□□□ -1.26
ABCD4-220ENST00000553998 SHISA5Q8N114 240 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 ZFP62Q8NB50 900 aaPredicted RBP7.19□□□□□ -1.26
ABCD4-220ENST00000553998 KCT2Q8NC54 265 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 OR2L5Q8NG80 312 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 SPATA3Q8NHX4 192 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 MGARPQ8TDB4 240 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 UTP15Q8TED0 518 aaKnown RBP7.19□□□□□ -1.26
ABCD4-220ENST00000553998 SELENOMQ8WWX9 145 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 MS4A6EQ96DS6 147 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 SMIM10Q96HG1 83 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 MDFIQ99750 246 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 CCT7Q99832 543 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 TBCDQ9BTW9 1192 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 MANSC1Q9H8J5 431 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 BRF2Q9HAW0 419 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 PRM3Q9NNZ6 103 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 RASSF1Q9NS23 344 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 INTS9Q9NV88 658 aaKnown RBP7.19□□□□□ -1.26
ABCD4-220ENST00000553998 THAP1Q9NVV9 213 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 HAO1Q9UJM8 370 aa7.19□□□□□ -1.26
ABCD4-220ENST00000553998 EDARQ9UNE0 448 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms