RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 CCDC188H7C350 402 aa2.88□□□□□ -1.95
SCFD1-210ENST00000553693 KBTBD11O94819 623 aa2.88□□□□□ -1.95
SCFD1-210ENST00000553693 IFNAR1P17181 557 aa2.88□□□□□ -1.95
SCFD1-210ENST00000553693 CALRP27797 417 aaKnown RBP2.88□□□□□ -1.95
SCFD1-210ENST00000553693 CDX1P47902 265 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-210ENST00000553693 IGLV3-21P80748 117 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-210ENST00000553693 CYLC2Q14093 348 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-210ENST00000553693 FASTKQ14296 549 aaKnown RBP2.88□□□□□ -1.95
SCFD1-210ENST00000553693 MAPK11Q15759 364 aa2.88□□□□□ -1.95
SCFD1-210ENST00000553693 TIMM50Q3ZCQ8 353 aa2.88□□□□□ -1.95
SCFD1-210ENST00000553693 RFTN2Q52LD8 501 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-210ENST00000553693 TEX35Q5T0J7 233 aa2.88□□□□□ -1.95
SCFD1-210ENST00000553693 PPP1R21Q6ZMI0 780 aa2.88□□□□□ -1.95
SCFD1-210ENST00000553693 MSANTD1Q6ZTZ1 278 aa2.88□□□□□ -1.95
SCFD1-210ENST00000553693 DZIP1Q86YF9 867 aaKnown RBP2.88□□□□□ -1.95
SCFD1-210ENST00000553693 CREBRFQ8IUR6 639 aa2.88□□□□□ -1.95
SCFD1-210ENST00000553693 PRR22Q8IZ63 422 aa2.88□□□□□ -1.95
SCFD1-210ENST00000553693 SPC24Q8NBT2 197 aa2.88□□□□□ -1.95
SCFD1-210ENST00000553693 OR6F1Q8NGZ6 308 aa2.88□□□□□ -1.95
SCFD1-210ENST00000553693 PSMA8Q8TAA3 256 aa2.88□□□□□ -1.95
SCFD1-210ENST00000553693 MGARPQ8TDB4 240 aa2.88□□□□□ -1.95
SCFD1-210ENST00000553693 BADQ92934 168 aa2.88□□□□□ -1.95
SCFD1-210ENST00000553693 KATNB1Q9BVA0 655 aa2.88□□□□□ -1.95
SCFD1-210ENST00000553693 UBQLN3Q9H347 655 aa2.88□□□□□ -1.95
SCFD1-210ENST00000553693 DBNDD1Q9H9R9 158 aa2.88□□□□□ -1.95
SCFD1-210ENST00000553693 NMUR1Q9HB89 426 aa2.88□□□□□ -1.95
SCFD1-210ENST00000553693 SNX7Q9UNH6 387 aa2.88□□□□□ -1.95
SCFD1-210ENST00000553693 COL24A1Q17RW2 1714 aa2.88□□□□□ -1.95
SCFD1-210ENST00000553693 POLR3AO14802 1390 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-210ENST00000553693 EIF3AQ14152 1382 aaKnown RBP2.87□□□□□ -1.95
SCFD1-210ENST00000553693 IGLON5A6NGN9 336 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 H0Y9J4 135 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 FBP2O00757 339 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 PRAF2O60831 178 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 OR6B1O95007 311 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 SEMA4FO95754 770 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 ANGPTL1O95841 491 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 HCKP08631 526 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 STMN1P16949 149 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 SLC1A6P48664 564 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 EVCP57679 992 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 NAAAQ02083 359 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 CNTN1Q12860 1018 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 ITPK1Q13572 414 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 SMU1Q2TAY7 513 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 DCLRE1AQ6PJP8 1040 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 SMIM5Q71RC9 77 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 PHLDB2Q86SQ0 1253 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 VASH2Q86V25 355 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 SIX6OS1Q8N1H7 587 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 ZNF713Q8N859 430 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-210ENST00000553693 BEST4Q8NFU0 473 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 NCOA7Q8NI08 942 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 FER1L6-AS2Q96M78 137 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 C5AR2Q9P296 337 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 ARMCX3Q9UH62 379 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-210ENST00000553693 IKZF3Q9UKT9 509 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 ISY1Q9ULR0 285 aaKnown RBP2.87□□□□□ -1.95
SCFD1-210ENST00000553693 CPQQ9Y646 472 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 PCNTO95613 3336 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 FAM205AQ6ZU69 1335 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 SALL1Q9NSC2 1324 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 COL18A1P39060 1754 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 ADGRB1O14514 1584 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 BRD4O60885 1362 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-210ENST00000553693 HEG1Q9ULI3 1381 aa2.87□□□□□ -1.95
SCFD1-210ENST00000553693 NHSQ6T4R5 1651 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 TOPAZ1Q8N9V7 1692 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 WDR90Q96KV7 1748 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 A0A0U1RQK1 487 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 ZNF320A2RRD8 509 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 SRRM4A7MD48 611 aaKnown RBP2.86□□□□□ -1.95
SCFD1-210ENST00000553693 PRSS46E5RG02 174 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 FLRT2O43155 660 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 VENTXO95231 258 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 FGF19O95750 216 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 VIMP08670 466 aaKnown RBP2.86□□□□□ -1.95
SCFD1-210ENST00000553693 EEF2P13639 858 aaKnown RBP2.86□□□□□ -1.95
SCFD1-210ENST00000553693 PDGFRAP16234 1089 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 MGMTP16455 207 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 ZNF19P17023 458 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 SOAT1P35610 550 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 SLC1A3P43003 542 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 NPY4RP50391 375 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 PEX3P56589 373 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 YWHAHQ04917 246 aaPredicted RBP2.86□□□□□ -1.95
SCFD1-210ENST00000553693 PPP2R5CQ13362 524 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 ZNF79Q15937 498 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 TAZQ16635 292 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 TTC31Q49AM3 519 aaPredicted RBP2.86□□□□□ -1.95
SCFD1-210ENST00000553693 SPOUT1Q5T280 376 aaKnown RBP2.86□□□□□ -1.95
SCFD1-210ENST00000553693 SLC27A4Q6P1M0 643 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 ARMCX5Q6P1M9 558 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 BTNL8Q6UX41 500 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 ABI3BPQ7Z7G0 1075 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 ZSCAN30Q86W11 494 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 C4orf19Q8IY42 314 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 APCDD1Q8J025 514 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 RAD54LQ92698 747 aa2.86□□□□□ -1.95
SCFD1-210ENST00000553693 TSSK2Q96PF2 358 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms