RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 EPORP19235 508 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 CASP2P42575 452 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 ZFP36L2P47974 494 aaKnown RBP10.95□□□□□ -0.66
CKAP4-202ENST00000552828 PLA2G16P53816 162 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 MTTPP55157 894 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 DLX5P56178 289 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 RNF4P78317 190 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 CBX1P83916 185 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 PCDH1Q08174 1060 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 DMTNQ08495 405 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 GTF2H2Q13888 395 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 DOC2AQ14183 400 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 ZNF750Q32MQ0 723 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 GTF2H2CQ6P1K8 395 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 TRIM40Q6P9F5 258 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 B3GNT6Q6ZMB0 384 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 SH2D5Q6ZV89 423 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 CLNKQ7Z7G1 428 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 TMEM200AQ86VY9 491 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 TMEM151AQ8N4L1 468 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 OR5L2Q8NGL0 311 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 OR5M9Q8NGP3 310 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 UBE2E3Q969T4 207 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 CSF3RQ99062 836 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 ALOXE3Q9BYJ1 711 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 LYRM4Q9HD34 91 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 SH2D2AQ9NP31 389 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 PRDM7Q9NQW5 492 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 Q9UFV3 132 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 LGALS13Q9UHV8 139 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 GRID1Q9ULK0 1009 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 ZNF490Q9ULM2 529 aaPredicted RBP10.95□□□□□ -0.66
CKAP4-202ENST00000552828 L3MBTL1Q9Y468 752 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 LIPGQ9Y5X9 500 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 HCFC1P51610 2035 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 INTS1Q8N201 2190 aaKnown RBP10.94□□□□□ -0.66
CKAP4-202ENST00000552828 CCDC151A5D8V7 595 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 ANKDD1BA6NHY2 528 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 LRRC14BA6NHZ5 514 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 COPEO14579 308 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 HCN1O60741 890 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 PRAMEF4O60810 478 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 ZWINTO95229 277 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 IFNA16P05015 189 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 SBK3P0C264 359 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 CERS1P27544 350 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 CRHR1P34998 444 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 ADH7P40394 386 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 MAGEA5P43359 124 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 IST1P53990 364 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 SLC18A2Q05940 514 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 STX4Q12846 297 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 MYBPHQ13203 477 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 SERTAD2Q14140 314 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 E2F2Q14209 437 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 SLC10A1Q14973 349 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 MPEG1Q2M385 716 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 SLC25A35Q3KQZ1 300 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 CCDC153Q494R4 210 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 PRAMEF9Q5VWM5 478 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 ZNF585AQ6P3V2 769 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 OPN5Q6U736 354 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 GOLGA7Q7Z5G4 137 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 LIX1LQ8IVB5 337 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 ZNF321PQ8N8H1 164 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 C7orf57Q8NEG2 295 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 OR10Q1Q8NGQ4 319 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 CCT6BQ92526 530 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 NRGNQ92686 78 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 ATP6V1E2Q96A05 226 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 OR8D2Q9GZM6 311 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 IPPKQ9H8X2 491 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 ACTR8Q9H981 624 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 SACM1LQ9NTJ5 587 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 PCDHGB3Q9Y5G1 929 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 ZNF407Q9C0G0 2248 aa10.94□□□□□ -0.66
CKAP4-202ENST00000552828 HRNRQ86YZ3 2850 aaPredicted RBP10.94□□□□□ -0.66
CKAP4-202ENST00000552828 ACANP16112 2415 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 A8MT66 165 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 C17orf105B2RV13 164 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 FAM47E-STBD1D6RA91 191 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 G3V3Y1 287 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 DLX3O60479 287 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 UGDHO60701 494 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 SCELO95171 688 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 CELA3AP09093 270 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 CD99P14209 185 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 ATP5F1P24539 256 aaPredicted RBP10.93□□□□□ -0.66
CKAP4-202ENST00000552828 FOLH1Q04609 750 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 TGM3Q08188 693 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 ZNF844Q08AG5 666 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 ZNF791Q3KP31 576 aaPredicted RBP10.93□□□□□ -0.66
CKAP4-202ENST00000552828 KRT71Q3SY84 523 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 PIGGQ5H8A4 983 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 LIPJQ5W064 366 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 ADNP2Q6IQ32 1131 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 MED27Q6P2C8 311 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 ARSKQ6UWY0 536 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 FAM47EQ6ZV65 393 aa10.93□□□□□ -0.66
CKAP4-202ENST00000552828 UBE3DQ7Z6J8 389 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms