RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 FAM76AQ8TAV0 307 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 C16orf78Q8WTQ4 265 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 SENP5Q96HI0 755 aaPredicted RBP17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 METTL2AQ96IZ6 378 aaKnown RBP17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 AGPAT4Q9NRZ5 378 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 C1orf109Q9NX04 203 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 SIRT5Q9NXA8 310 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 UTS2RQ9UKP6 389 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 ERVK-19Q9WJR5 959 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 ENTPD4Q9Y227 616 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 DNAJC15Q9Y5T4 150 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 PTGDR2Q9Y5Y4 395 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 RP1L1Q8IWN7 2480 aaPredicted RBP17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 ITGA10O75578 1167 aa17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 LINC00032P0C843 101 aa17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 DHRS4L1P0CG22 281 aa17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 PORP16435 677 aaPredicted RBP17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 CSNK2A2P19784 350 aaPredicted RBP17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 GRK2P25098 689 aa17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 CD96P40200 585 aa17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 ST13P50502 369 aaKnown RBP17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 SSR4P51571 173 aa17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 FOXK1P85037 733 aa17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 INAQ16352 499 aa17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 ZNF766Q5HY98 468 aa17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 FAM180AQ6UWF9 173 aa17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 RNF111Q6ZNA4 994 aa17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 SAMD14Q8IZD0 417 aaPredicted RBP17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 GOLGA6L1Q8N7Z2 621 aa17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 ZNF321PQ8N8H1 164 aa17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 OR8K3Q8NH51 312 aa17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 MGARPQ8TDB4 240 aa17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 DOK4Q8TEW6 326 aa17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 ZNF721Q8TF20 911 aa17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 TMEM125Q96AQ2 219 aa17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 MIB2Q96AX9 1013 aa17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 SNRNP40Q96DI7 357 aaKnown RBP17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 MIEF1Q9NQG6 463 aa17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 LRFN1Q9P244 771 aa17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 YARS2Q9Y2Z4 477 aaKnown RBP17.18■□□□□ 0.34
PRPF40B-216ENST00000552301 PIP5K1BO14986 540 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 VPS4BO75351 444 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 BGNP21810 368 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 PRPH2P23942 346 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 FEN1P39748 380 aaKnown RBP17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 ABCE1P61221 599 aaKnown RBP17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 RPL38P63173 70 aaKnown RBP17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 RNF4P78317 190 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 MPP2Q14168 576 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 IGFBP7Q16270 282 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 GALNTL6Q49A17 601 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 AGBL2Q5U5Z8 902 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 NOXRED1Q6NXP6 359 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 RPUSD3Q6P087 351 aaKnown RBP17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 DGAT2L6Q6ZPD8 337 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 SLC29A4Q7RTT9 530 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 HDXQ7Z353 690 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 KIRREL3Q8IZU9 778 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 ARMC10Q8N2F6 343 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 LRRC25Q8N386 305 aaPredicted RBP17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 TMEM178AQ8NBL3 297 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 OR6Y1Q8NGX8 325 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 ASB15Q8WXK1 588 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 EXOSC8Q96B26 276 aaKnown RBP17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 TLCD1Q96CP7 247 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 C11orf24Q96F05 449 aaPredicted RBP17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 GAL3ST4Q96RP7 486 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 BRINP2Q9C0B6 783 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 CXorf21Q9HAI6 301 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 KLHL1Q9NR64 748 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 ASF1BQ9NVP2 202 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 MYOTQ9UBF9 498 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 HEY2Q9UBP5 337 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 CES1P1Q9UKY3 287 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 VPS4AQ9UN37 437 aa17.17■□□□□ 0.34
PRPF40B-216ENST00000552301 CROCCQ5TZA2 2017 aa17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 A0A1W2PS29 197 aa17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 NPIPB8E9PQR5 432 aa17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 WWP2O00308 870 aa17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 PRKNO60260 465 aaPredicted RBP17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 SKAP2O75563 359 aaPredicted RBP17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 LYPLA1O75608 230 aaPredicted RBP17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 SNUPNO95149 360 aaKnown RBP17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 WISP1O95388 367 aa17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 IGKV3-11P04433 115 aa17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 TRHRP34981 398 aaPredicted RBP17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 HLCSP50747 726 aa17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 HK2P52789 917 aa17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 C2orf80Q0P641 193 aa17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 STX3Q13277 289 aa17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 SPINK14Q6IE38 97 aa17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 CYP4Z2PQ8N1L4 340 aa17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 FAM98AQ8NCA5 519 aaKnown RBP17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 MDS2Q8NDY4 140 aa17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 NUBPLQ8TB37 319 aa17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 PPP3R2Q96LZ3 170 aa17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 SIGLEC12Q96PQ1 595 aa17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 CCT7Q99832 543 aa17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 TUBB1Q9H4B7 451 aa17.16■□□□□ 0.34
PRPF40B-216ENST00000552301 LIN28AQ9H9Z2 209 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms