RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 STON1Q9Y6Q2 735 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 PRAMEF33A0A0G2JMD5 474 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 PRAMEF10O60809 474 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 TNFSF8P32971 234 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 DRD3P35462 400 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 SLC16A1P53985 500 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 ITGA1P56199 1179 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 DEFA1P59665 94 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 DEFA3P59666 94 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 CXCR4P61073 352 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 ZNF33BQ06732 778 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 SLAMF1Q13291 335 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 PIN1Q13526 163 aaPredicted RBP10.53□□□□□ -0.72
LINC00661-204ENST00000549354 BCL2A1Q16548 175 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 SNAP47Q5SQN1 464 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 ATAD3CQ5T2N8 411 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 ADAMTSL4Q6UY14 1074 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 NUDT18Q6ZVK8 323 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 RD3Q7Z3Z2 195 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 SERPINA11Q86U17 422 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 GLCCI1Q86VQ1 547 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 MINDY2Q8NBR6 621 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 VPS37AQ8NEZ2 397 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 IPCEF1Q8WWN9 437 aaPredicted RBP10.53□□□□□ -0.72
LINC00661-204ENST00000549354 DACT3Q96B18 629 aaPredicted RBP10.53□□□□□ -0.72
LINC00661-204ENST00000549354 CMTM7Q96FZ5 175 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 ZNF514Q96K75 400 aaPredicted RBP10.53□□□□□ -0.72
LINC00661-204ENST00000549354 RIPOR3Q96MK2 946 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 FYTTD1Q96QD9 318 aaKnown RBP10.53□□□□□ -0.72
LINC00661-204ENST00000549354 TBX5Q99593 518 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 ZCCHC2Q9C0B9 1178 aaKnown RBP10.53□□□□□ -0.72
LINC00661-204ENST00000549354 GPR34Q9UPC5 381 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 PRAMEF25A6NGN4 478 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 ANHXE9PGG2 379 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 ARHGAP33O14559 1287 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 HAT1O14929 419 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 VEGFDO43915 354 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 LZTS3O60299 673 aaPredicted RBP10.53□□□□□ -0.72
LINC00661-204ENST00000549354 UGDHO60701 494 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 MMP20O60882 483 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 SCN2BO60939 215 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 PCSK2P16519 638 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 TEAD1P28347 426 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 GDI1P31150 447 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 CNR2P34972 360 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 SOX6P35712 828 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 KIR2DL1P43626 348 aaPredicted RBP10.53□□□□□ -0.72
LINC00661-204ENST00000549354 UGT2B15P54855 530 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 PFN3P60673 137 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 CSTF3Q12996 717 aaKnown RBP10.53□□□□□ -0.72
LINC00661-204ENST00000549354 E2F2Q14209 437 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 PTGES3Q15185 160 aaKnown RBP10.53□□□□□ -0.72
LINC00661-204ENST00000549354 RGNQ15493 299 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 C2orf27AQ580R0 203 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 MMAAQ8IVH4 418 aaKnown RBP10.53□□□□□ -0.72
LINC00661-204ENST00000549354 TXNDC15Q96J42 360 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 DEPDC7Q96QD5 511 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 GFM1Q96RP9 751 aaKnown RBP10.53□□□□□ -0.72
LINC00661-204ENST00000549354 DYRK4Q9NR20 520 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 MAN2B2Q9Y2E5 1009 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 COL4A2P08572 1712 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 GCM2O75603 506 aaPredicted RBP10.53□□□□□ -0.72
LINC00661-204ENST00000549354 GPX5O75715 221 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 EPHX1P07099 455 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 CLEC2LP0C7M8 214 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 S100A1P23297 94 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 MAPK1P28482 360 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 GPC1P35052 558 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 GGT2P36268 569 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 RPS19P39019 145 aaKnown RBP10.53□□□□□ -0.72
LINC00661-204ENST00000549354 SCARB2Q14108 478 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 BAK1Q16611 211 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 ZNF181Q2M3W8 571 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 TCEANCQ8N8B7 351 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 KBTBD8Q8NFY9 601 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 MSLNLQ96KJ4 702 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 F2RL3Q96RI0 385 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 DOHHQ9BU89 302 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 RPP25Q9BUL9 199 aaKnown RBP10.53□□□□□ -0.72
LINC00661-204ENST00000549354 PCDHB11Q9Y5F2 797 aa10.53□□□□□ -0.72
LINC00661-204ENST00000549354 K7EQS6 105 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 IL3P08700 152 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 GPX2P18283 190 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 TAS2R38P59533 333 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 INSL4Q14641 139 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 TBRG1Q3YBR2 411 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 ZFP69Q49AA0 526 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 PNCKQ6P2M8 343 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 MTSS1LQ765P7 747 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 C11orf65Q8NCR3 313 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 IL17RDQ8NFM7 739 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 CITED4Q96RK1 184 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 TMEM246Q9BRR3 403 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 ASPNQ9BXN1 380 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 SP140LQ9H930 580 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 TRBC2A0A5B9 178 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 ANKRD34BA5PLL1 514 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 H7BY64 318 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 M0R3H8 397 aa10.52□□□□□ -0.73
LINC00661-204ENST00000549354 SERPINI2O75830 405 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms