RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 YIPF4Q9BSR8 244 aa7.8□□□□□ -1.16
TROAP-208ENST00000548817 AMBRA1Q9C0C7 1298 aa7.8□□□□□ -1.16
TROAP-208ENST00000548817 DERL2Q9GZP9 239 aa7.8□□□□□ -1.16
TROAP-208ENST00000548817 KCNF1Q9H3M0 494 aa7.8□□□□□ -1.16
TROAP-208ENST00000548817 RHOJQ9H4E5 214 aa7.8□□□□□ -1.16
TROAP-208ENST00000548817 ZFP64Q9NPA5 681 aa7.8□□□□□ -1.16
TROAP-208ENST00000548817 PRDM7Q9NQW5 492 aa7.8□□□□□ -1.16
TROAP-208ENST00000548817 RYDENQ9NUL5 291 aaKnown RBP7.8□□□□□ -1.16
TROAP-208ENST00000548817 MS4A12Q9NXJ0 267 aa7.8□□□□□ -1.16
TROAP-208ENST00000548817 CNIH4Q9P003 139 aa7.8□□□□□ -1.16
TROAP-208ENST00000548817 ADGRE2Q9UHX3 823 aa7.8□□□□□ -1.16
TROAP-208ENST00000548817 RNF112Q9ULX5 631 aa7.8□□□□□ -1.16
TROAP-208ENST00000548817 LIPGQ9Y5X9 500 aa7.8□□□□□ -1.16
TROAP-208ENST00000548817 PSAT1Q9Y617 370 aa7.8□□□□□ -1.16
TROAP-208ENST00000548817 TEX264Q9Y6I9 313 aa7.8□□□□□ -1.16
TROAP-208ENST00000548817 ARHGAP21Q5T5U3 1957 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 C15orf38-AP3S2A0A0A6YYH1 394 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 TP53I11O14683 189 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 OR10H2O60403 315 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 SH3BGRLO75368 114 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 TRAPPC6AO75865 159 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 ETHE1O95571 254 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 IL2RAP01589 272 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 CELA3AP09093 270 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 CCL3P10147 92 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 STMN1P16949 149 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 TCP1P17987 556 aaKnown RBP7.79□□□□□ -1.16
TROAP-208ENST00000548817 FPR1P21462 350 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 HIST1H1TP22492 207 aaPredicted RBP7.79□□□□□ -1.16
TROAP-208ENST00000548817 GGT5P36269 586 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 STT3AP46977 705 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 NR0B1P51843 470 aaKnown RBP7.79□□□□□ -1.16
TROAP-208ENST00000548817 RPP38P78345 283 aaKnown RBP7.79□□□□□ -1.16
TROAP-208ENST00000548817 PHEXP78562 749 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 SLAMF1Q13291 335 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 HLA-DQA1Q5Y7H0 255 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 MED27Q6P2C8 311 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 MAATS1Q7Z4T9 603 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 KLHL7Q8IXQ5 586 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 TAGAPQ8N103 731 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 RELL2Q8NC24 303 aaPredicted RBP7.79□□□□□ -1.16
TROAP-208ENST00000548817 FBXO36Q8NEA4 188 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 NUBPLQ8TB37 319 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 ZNF721Q8TF20 911 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 ANKRD49Q8WVL7 239 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 TANKQ92844 425 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 SLCO2A1Q92959 643 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 EXT2Q93063 718 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 RGMAQ96B86 450 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 SPACA9Q96E40 222 aaPredicted RBP7.79□□□□□ -1.16
TROAP-208ENST00000548817 CMTM7Q96FZ5 175 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 CAPZA3Q96KX2 299 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 GAL3ST4Q96RP7 486 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 PELOQ9BRX2 385 aaKnown RBP7.79□□□□□ -1.16
TROAP-208ENST00000548817 CNPPD1Q9BV87 410 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 RPF2Q9H7B2 306 aaKnown RBP7.79□□□□□ -1.16
TROAP-208ENST00000548817 WDR41Q9HAD4 459 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 QPCTLQ9NXS2 382 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 ZNF629Q9UEG4 869 aaPredicted RBP7.79□□□□□ -1.16
TROAP-208ENST00000548817 PHF11Q9UIL8 331 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 ZNF490Q9ULM2 529 aaPredicted RBP7.79□□□□□ -1.16
TROAP-208ENST00000548817 PYCARDQ9ULZ3 195 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 SNX12Q9UMY4 172 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 ATG4BQ9Y4P1 393 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 ANGPTL3Q9Y5C1 460 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 PCDHGB3Q9Y5G1 929 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 CLDN16Q9Y5I7 305 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.79□□□□□ -1.162e-6■■■□□ 19
TROAP-208ENST00000548817 MGAM2Q2M2H8 2515 aa7.79□□□□□ -1.16
TROAP-208ENST00000548817 FREM3P0C091 2139 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 AHRRA9YTQ3 701 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 RTCAO00442 366 aaKnown RBP7.78□□□□□ -1.16
TROAP-208ENST00000548817 TAPBPO15533 448 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 TGFB1P01137 390 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 FAM157CP0CG43 387 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 ALOX15P16050 662 aaPredicted RBP7.78□□□□□ -1.16
TROAP-208ENST00000548817 BMP5P22003 454 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 IVDP26440 423 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 GDF1P27539 372 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 GCKP35557 465 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 BUD31P41223 144 aaPredicted RBP7.78□□□□□ -1.16
TROAP-208ENST00000548817 CASP2P42575 452 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 TRPC1P48995 793 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 FOXO1Q12778 655 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 DDX39BQ13838 428 aaKnown RBP7.78□□□□□ -1.16
TROAP-208ENST00000548817 ZNF267Q14586 743 aaPredicted RBP7.78□□□□□ -1.16
TROAP-208ENST00000548817 TOMM20Q15388 145 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 TBCCQ15814 346 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 KRTAP24-1Q3LI83 254 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 CHRFAM7AQ494W8 412 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 FBXO48Q5FWF7 155 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 TBCELQ5QJ74 424 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 C6orf163Q5TEZ5 329 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 PRAMEF20Q5VT98 475 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 OR4C11Q6IEV9 310 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 RNF111Q6ZNA4 994 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 RAPH1Q70E73 1250 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 LRRC70Q7Z2Q7 622 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 VN1R5Q7Z5H4 357 aa7.78□□□□□ -1.16
TROAP-208ENST00000548817 GPR180Q86V85 440 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms