RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 HSPA14Q0VDF9 509 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 FUT7Q11130 342 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 CEACAM7Q14002 265 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 RCN1Q15293 331 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 TRIP10Q15642 601 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 TATDN3Q17R31 274 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 FGD3Q5JSP0 725 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 RABGAP1LQ5R372 815 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 IRAK1BP1Q5VVH5 260 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 TPGS2Q68CL5 300 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 CDC42EP5Q6NZY7 148 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 NIPAL3Q6P499 406 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 CEACAM20Q6UY09 585 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 TMEM64Q6YI46 380 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 PIWIL4Q7Z3Z4 852 aaKnown RBP3.82□□□□□ -1.8
SCAF11-210ENST00000547654 VPS36Q86VN1 386 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 TMEM219Q86XT9 240 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 ELMOD1Q8N336 334 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 PGBD5Q8N414 524 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 DNAJC22Q8N4W6 341 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 MLKLQ8NB16 471 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 CCDC197Q8NCU1 140 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 BBOF1Q8ND07 529 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 BHLHE23Q8NDY6 225 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 OR13C3Q8NGS6 347 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 OR13C5Q8NGS8 318 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 OR4L1Q8NH43 312 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 SPATA22Q8NHS9 363 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 PNPT1Q8TCS8 783 aaKnown RBP3.82□□□□□ -1.8
SCAF11-210ENST00000547654 MCHR2Q969V1 340 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 BPIFA2Q96DR5 249 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 MRPL53Q96EL3 112 aaKnown RBP3.82□□□□□ -1.8
SCAF11-210ENST00000547654 KRT12Q99456 494 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 AGPAT1Q99943 283 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 GAREM1Q9H706 876 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 DDX31Q9H8H2 851 aaKnown RBP3.82□□□□□ -1.8
SCAF11-210ENST00000547654 VIPAS39Q9H9C1 493 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 DDX18Q9NVP1 670 aaKnown RBP3.82□□□□□ -1.8
SCAF11-210ENST00000547654 AIPL1Q9NZN9 384 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 RNF14Q9UBS8 474 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 KCNS2Q9ULS6 477 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 KIAA1217Q5T5P2 1943 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 DIP2AQ14689 1571 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 PTCH1Q13635 1447 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 NPC1L1Q9UHC9 1359 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 MBLAC1A4D2B0 266 aaPredicted RBP3.81□□□□□ -1.8
SCAF11-210ENST00000547654 FAM25EA8MYX2 175 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 ZNF732B4DXR9 585 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 ZNF208O43345 1280 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 EXTL3O43909 919 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 B4GALT2O60909 372 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 PRKRAO75569 313 aaKnown RBP3.81□□□□□ -1.8
SCAF11-210ENST00000547654 SERPINA3P01011 423 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 FCGR1AP12314 374 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 GP9P14770 177 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 DARSP14868 501 aaKnown RBP3.81□□□□□ -1.8
SCAF11-210ENST00000547654 ACADVLP49748 655 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 RGS4P49798 205 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 RELQ04864 619 aaPredicted RBP3.81□□□□□ -1.8
SCAF11-210ENST00000547654 SLC20A2Q08357 652 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 TRAF2Q12933 501 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 IDI1Q13907 227 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 PPP1R7Q15435 360 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 CFAP221Q4G0U5 840 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 LIPJQ5W064 366 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 RHBDF2Q6PJF5 856 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 ANGPTL8Q6UXH0 198 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 GFRALQ6UXV0 394 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 PAQR9Q6ZVX9 377 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 EFL1Q7Z2Z2 1120 aaKnown RBP3.81□□□□□ -1.8
SCAF11-210ENST00000547654 SFR1Q86XK3 245 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 SLC22A9Q8IVM8 553 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 UBQLNLQ8IYU4 475 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 GOLGA5Q8TBA6 731 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 TRMT10AQ8TBZ6 339 aaKnown RBP3.81□□□□□ -1.8
SCAF11-210ENST00000547654 GRHL3Q8TE85 626 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 PIK3R3Q92569 461 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 AZIN2Q96A70 460 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 ZNF274Q96GC6 653 aaPredicted RBP3.81□□□□□ -1.8
SCAF11-210ENST00000547654 HPDLQ96IR7 371 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 C4orf45Q96LM5 186 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 INPP4AQ96PE3 977 aaPredicted RBP3.81□□□□□ -1.8
SCAF11-210ENST00000547654 RAB40CQ96S21 281 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 CDCA3Q99618 268 aaPredicted RBP3.81□□□□□ -1.8
SCAF11-210ENST00000547654 NFKBIZQ9BYH8 718 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 PKIBQ9C010 78 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 SLC26A1Q9H2B4 701 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 FAM124BQ9H5Z6 455 aaPredicted RBP3.81□□□□□ -1.8
SCAF11-210ENST00000547654 ZNF665Q9H7R5 613 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 RAB20Q9NX57 234 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 ZNF319Q9P2F9 582 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 EPHA6Q9UF33 1036 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 PILRAQ9UKJ1 303 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 DIMT1Q9UNQ2 313 aaKnown RBP3.81□□□□□ -1.8
SCAF11-210ENST00000547654 PLCL2Q9UPR0 1127 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 SATB2Q9UPW6 733 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 OR10H1Q9Y4A9 318 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 BRWD3Q6RI45 1802 aa3.81□□□□□ -1.8
SCAF11-210ENST00000547654 MAP3K1Q13233 1512 aa3.8□□□□□ -1.8
SCAF11-210ENST00000547654 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms