RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 H2AFY2Q9P0M6 372 aaPredicted RBP12.34□□□□□ -0.43
BRF1-210ENST00000547374 EPHX1P07099 455 aa12.34□□□□□ -0.43
BRF1-210ENST00000547374 RHCEP18577 417 aa12.34□□□□□ -0.43
BRF1-210ENST00000547374 PPP2R1BP30154 601 aa12.34□□□□□ -0.43
BRF1-210ENST00000547374 TAP2Q03519 686 aa12.34□□□□□ -0.43
BRF1-210ENST00000547374 IRF5Q13568 498 aa12.34□□□□□ -0.43
BRF1-210ENST00000547374 TPGS2Q68CL5 300 aa12.34□□□□□ -0.43
BRF1-210ENST00000547374 IL20RBQ6UXL0 311 aa12.34□□□□□ -0.43
BRF1-210ENST00000547374 OR4K5Q8NGD3 323 aa12.34□□□□□ -0.43
BRF1-210ENST00000547374 TMCO6Q96DC7 493 aa12.34□□□□□ -0.43
BRF1-210ENST00000547374 TXNDC15Q96J42 360 aa12.34□□□□□ -0.43
BRF1-210ENST00000547374 NELL2Q99435 816 aa12.34□□□□□ -0.43
BRF1-210ENST00000547374 MAPKAP1Q9BPZ7 522 aa12.34□□□□□ -0.43
BRF1-210ENST00000547374 BARHL1Q9BZE3 327 aa12.34□□□□□ -0.43
BRF1-210ENST00000547374 HHATLQ9HCP6 504 aa12.34□□□□□ -0.43
BRF1-210ENST00000547374 TEX10Q9NXF1 929 aaPredicted RBP12.34□□□□□ -0.43
BRF1-210ENST00000547374 RNASET2O00584 256 aaKnown RBP12.33□□□□□ -0.44
BRF1-210ENST00000547374 ABLIM3O94929 683 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 MAN2A2P49641 1150 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 SLC30A6Q6NXT4 461 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 IL17RDQ8NFM7 739 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 OR9A1PQ8NGU1 263 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 OVCA2Q8WZ82 227 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 GABARAPL3Q9BY60 117 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 CMAHPQ9Y471 501 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 BACE2Q9Y5Z0 518 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 TANC1Q9C0D5 1861 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 NOTOA8MTQ0 251 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 H0YIV9 168 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 C1orf105O95561 183 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 MYL9P24844 172 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 IL12RB1P42701 662 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 NCBP2P52298 156 aaKnown RBP eCLIP12.33□□□□□ -0.44
BRF1-210ENST00000547374 RPS25P62851 125 aaKnown RBP12.33□□□□□ -0.44
BRF1-210ENST00000547374 ACSM5Q6NUN0 579 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 ZNF730Q6ZMV8 503 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 AMER3Q8N944 861 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 OR4F15Q8NGB8 312 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 TFGQ92734 400 aaPredicted RBP12.33□□□□□ -0.44
BRF1-210ENST00000547374 IRF7Q92985 503 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 FCRL4Q96PJ5 515 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 ZSCAN5AQ9BUG6 496 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 TMEM39AQ9NV64 488 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 NKIRAS2Q9NYR9 191 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 TAAR2Q9P1P5 351 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 PTGFRNQ9P2B2 879 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 IL36AQ9UHA7 158 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 NTNG1Q9Y2I2 539 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 URB1O60287 2271 aaKnown RBP12.33□□□□□ -0.44
BRF1-210ENST00000547374 DICER1Q9UPY3 1922 aaKnown RBP12.33□□□□□ -0.44
BRF1-210ENST00000547374 FFAR1O14842 300 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 HBQ1P09105 142 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 SOX18P35713 384 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 CSTF1Q05048 431 aaKnown RBP12.33□□□□□ -0.44
BRF1-210ENST00000547374 SP140Q13342 867 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 TMEM215Q68D42 235 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 PODNL1Q6PEZ8 512 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 TMEM175Q9BSA9 504 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 C11orf54Q9H0W9 315 aaPredicted RBP12.33□□□□□ -0.44
BRF1-210ENST00000547374 IRF2BPLQ9H1B7 796 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 SLAMF7Q9NQ25 335 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 AHSPQ9NZD4 102 aa12.33□□□□□ -0.44
BRF1-210ENST00000547374 RPL36Q9Y3U8 105 aaKnown RBP12.33□□□□□ -0.44
BRF1-210ENST00000547374 SEC16AO15027 2179 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 LOC102723532A0A0G2JNH3 316 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 CTSLP07711 333 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 SLC2A2P11168 524 aaPredicted RBP12.32□□□□□ -0.44
BRF1-210ENST00000547374 GPR4P46093 362 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 HTR3AP46098 478 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 CLCNKAP51800 687 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 PRKCDQ05655 676 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 TUBA3EQ6PEY2 450 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 LIPIQ6XZB0 460 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 PDZD3Q86UT5 571 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 MARCH9Q86YJ5 346 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 KRT78Q8N1N4 520 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 BBS10Q8TAM1 723 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 FBLIM1Q8WUP2 373 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 ZNF607Q96SK3 696 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 BCL7BQ9BQE9 202 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 EFCAB11Q9BUY7 163 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 OR51I1Q9H343 314 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 ZNF624Q9P2J8 865 aaPredicted RBP12.32□□□□□ -0.44
BRF1-210ENST00000547374 SNX7Q9UNH6 387 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 SLC9A8Q9Y2E8 581 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 GPSM3Q9Y4H4 160 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 H3BQ06 376 aaPredicted RBP12.32□□□□□ -0.44
BRF1-210ENST00000547374 H3BSH0 61 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 ARHGEF9O43307 516 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 RB1P06400 928 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 ETV5P41161 510 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 XCR1P46094 333 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 ETV1P50549 477 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 HNRNPFP52597 415 aaKnown RBP12.32□□□□□ -0.44
BRF1-210ENST00000547374 TCEAL5Q5H9L2 206 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 IDNKQ5T6J7 187 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 TCTN3Q6NUS6 607 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 NXPE4Q6UWF7 544 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 HSDL2Q6YN16 418 aa12.32□□□□□ -0.44
BRF1-210ENST00000547374 FAM129CQ86XR2 697 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms