RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 PLOD2O00469 737 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 ERI3O43414 337 aaKnown RBP6.6□□□□□ -1.35
COPA-207ENST00000545284 ABCB7O75027 752 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 ADAM11O75078 769 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 H2AFYO75367 372 aaKnown RBP6.6□□□□□ -1.35
COPA-207ENST00000545284 CLEC3AO75596 197 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 CBR3O75828 277 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 SMNDC1O75940 238 aaKnown RBP eCLIP6.6□□□□□ -1.35
COPA-207ENST00000545284 CGAP01215 116 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 ALDOAP04075 364 aaKnown RBP6.6□□□□□ -1.35
COPA-207ENST00000545284 PTMAP06454 111 aaKnown RBP6.6□□□□□ -1.35
COPA-207ENST00000545284 APRTP07741 180 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 ENO2P09104 434 aaPredicted RBP6.6□□□□□ -1.35
COPA-207ENST00000545284 RHOXF2BP0C7M4 288 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 SLC25A16P16260 332 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 EGR1P18146 543 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 SAT1P21673 171 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 PTPN6P29350 595 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 GALNSP34059 522 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 CASP3P42574 277 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 KIR2DL2P43627 348 aaPredicted RBP6.6□□□□□ -1.35
COPA-207ENST00000545284 STT3AP46977 705 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 COMPP49747 757 aaPredicted RBP6.6□□□□□ -1.35
COPA-207ENST00000545284 HNRNPFP52597 415 aaKnown RBP6.6□□□□□ -1.35
COPA-207ENST00000545284 IGLV3-21P80748 117 aaPredicted RBP6.6□□□□□ -1.35
COPA-207ENST00000545284 CDK16Q00536 496 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 DHX9Q08211 1270 aaKnown RBP6.6□□□□□ -1.35
COPA-207ENST00000545284 KLF1Q13351 362 aaPredicted RBP6.6□□□□□ -1.35
COPA-207ENST00000545284 SNTA1Q13424 505 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 CUL1Q13616 776 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 RBBP5Q15291 538 aaKnown RBP6.6□□□□□ -1.35
COPA-207ENST00000545284 PDLIM3Q53GG5 364 aaPredicted RBP6.6□□□□□ -1.35
COPA-207ENST00000545284 TOR1AIP1Q5JTV8 583 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 TRIM40Q6P9F5 258 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 NXPE4Q6UWF7 544 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 CLNKQ7Z7G1 428 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 GRAMD2AQ8IUY3 354 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 KLHDC8AQ8IYD2 350 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 FAM47BQ8NA70 645 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 FAM83FQ8NEG4 500 aaPredicted RBP6.6□□□□□ -1.35
COPA-207ENST00000545284 C17orf47Q8NEP4 570 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 OR1J4Q8NGS1 313 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 CD200R1Q8TD46 325 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 SMAP2Q8WU79 429 aaPredicted RBP6.6□□□□□ -1.35
COPA-207ENST00000545284 AKAP1Q92667 903 aaKnown RBP eCLIP6.6□□□□□ -1.35
COPA-207ENST00000545284 NEIL2Q969S2 332 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 RHBDF1Q96CC6 855 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 FBXL8Q96CD0 374 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 MFSD3Q96ES6 412 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 C11orf24Q96F05 449 aaPredicted RBP6.6□□□□□ -1.35
COPA-207ENST00000545284 HS6ST2Q96MM7 605 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 OR4K3Q96R72 315 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 NDNQ99608 321 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 GPR21Q99679 349 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 PIGQQ9BRB3 760 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 PELOQ9BRX2 385 aaKnown RBP6.6□□□□□ -1.35
COPA-207ENST00000545284 G6PC3Q9BUM1 346 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 REXO4Q9GZR2 422 aaKnown RBP6.6□□□□□ -1.35
COPA-207ENST00000545284 GOLPH3Q9H4A6 298 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 NT5DC2Q9H857 520 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 SNX15Q9NRS6 342 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 RAB6BQ9NRW1 208 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 ARL15Q9NXU5 204 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 WHRNQ9P202 907 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 PAK5Q9P286 719 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 SNX8Q9Y5X2 465 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 SPACA6W5XKT8 324 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 USF3Q68DE3 2245 aa6.6□□□□□ -1.35
COPA-207ENST00000545284 SCN3AQ9NY46 2000 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 RAI1Q7Z5J4 1906 aaPredicted RBP6.59□□□□□ -1.35
COPA-207ENST00000545284 MAGEB16A2A368 324 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 CTAGE9A4FU28 777 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 C4orf51C9J302 202 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 UBFD1O14562 309 aaKnown RBP6.59□□□□□ -1.35
COPA-207ENST00000545284 TCF21O43680 179 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 GPRIN2O60269 458 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 IGHV4-39P01824 125 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 THBDP07204 575 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 TPM1P09493 284 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 NAGAP17050 411 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 GNAZP19086 355 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 DEKP35659 375 aaKnown RBP6.59□□□□□ -1.35
COPA-207ENST00000545284 MAGEA1P43355 309 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 LHX2P50458 406 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 GFRA1P56159 465 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 NRG3P56975 720 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 EEFSECP57772 596 aaKnown RBP6.59□□□□□ -1.35
COPA-207ENST00000545284 SESN2P58004 480 aaPredicted RBP6.59□□□□□ -1.35
COPA-207ENST00000545284 PLIN5Q00G26 463 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 TOMM20Q15388 145 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 SPRED3Q2MJR0 410 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 SLC30A6Q6NXT4 461 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 TMIGD1Q6UXZ0 262 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 CHMP1BQ7LBR1 199 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 PIWIL4Q7Z3Z4 852 aaKnown RBP6.59□□□□□ -1.35
COPA-207ENST00000545284 TRIM42Q8IWZ5 723 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 MYO1HQ8N1T3 1032 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 DEPDC4Q8N2C3 294 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 CALML6Q8TD86 181 aa6.59□□□□□ -1.35
COPA-207ENST00000545284 EEF1AKMT1Q8WVE0 214 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms