RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 NPLQ9BXD5 320 aaPredicted RBP12.22□□□□□ -0.45
CHD4-211ENST00000544484 TXLNGYQ9BZA5 131 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 EXOSC1Q9Y3B2 195 aaKnown RBP12.22□□□□□ -0.45
CHD4-211ENST00000544484 UNC119BA6NIH7 251 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 SCGB1D2O95969 90 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 CLDN2P57739 230 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 MAD2L1BPQ15013 274 aaPredicted RBP12.22□□□□□ -0.45
CHD4-211ENST00000544484 NDUFAF5Q5TEU4 345 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 UBQLNLQ8IYU4 475 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 SGCDQ92629 289 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 RHBDF1Q96CC6 855 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 CCRL2O00421 344 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 NME4O00746 187 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 LAMTOR5O43504 91 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 STSP08842 583 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 NR2C1P13056 603 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 CCSAPQ6IQ19 270 aaPredicted RBP12.22□□□□□ -0.45
CHD4-211ENST00000544484 OR8S1Q8NH09 359 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 DAZLQ92904 295 aaKnown RBP12.22□□□□□ -0.45
CHD4-211ENST00000544484 OR1F2PQ96R84 312 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 CLSTN3Q9BQT9 956 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 MTMR10Q9NXD2 777 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 ST14Q9Y5Y6 855 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 CHD4Q14839 1912 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 ZSCAN5BA6NJL1 495 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 MT-ND2P03891 347 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 ADH7P40394 386 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 TAS2R38P59533 333 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 NPRL3Q12980 569 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 LPAL2Q16609 132 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 TMEM234Q8WY98 164 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 ISOC1Q96CN7 298 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 FEVQ99581 238 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 MACROD1Q9BQ69 325 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 SYT11Q9BT88 431 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 ENAMQ9NRM1 1142 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 FAM53CQ9NYF3 392 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 ANKMY1Q9P2S6 941 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 CMAHPQ9Y471 501 aa12.22□□□□□ -0.45
CHD4-211ENST00000544484 MYO18AQ92614 2054 aaKnown RBP12.22□□□□□ -0.45
CHD4-211ENST00000544484 ZBTB42B2RXF5 422 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 MAN2B1O00754 1011 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 AK4P27144 223 aaPredicted RBP12.21□□□□□ -0.45
CHD4-211ENST00000544484 ZNF423Q2M1K9 1284 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 MEDAGQ5VYS4 303 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 ZFP41Q8N8Y5 198 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 FAM3CQ92520 227 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 KLF16Q9BXK1 252 aaPredicted RBP12.21□□□□□ -0.45
CHD4-211ENST00000544484 DPAGT1Q9H3H5 408 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 GSTO2Q9H4Y5 243 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 C4BP0C0L5 1744 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 OR2AT4A6NND4 320 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 FLRT2O43155 660 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 DRD2P14416 443 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 RGRP47804 291 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 UGT3A2Q3SY77 523 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 ZNF517Q6ZMY9 492 aaPredicted RBP12.21□□□□□ -0.45
CHD4-211ENST00000544484 NLGN4XQ8N0W4 816 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 CCDC107Q8WV48 283 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 EHD1Q9H4M9 534 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 NUP98P52948 1817 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 H0YAE9 185 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 ACVR1BP36896 505 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 HK3P52790 923 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 CRISP1P54107 249 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 TMEM35AQ53FP2 167 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 RPS26P11Q5JNZ5 115 aaPredicted RBP12.21□□□□□ -0.45
CHD4-211ENST00000544484 PAGE3Q5JUK9 113 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 UBE2Q1Q7Z7E8 422 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 ZDHHC1Q8WTX9 485 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 KIAA1143Q96AT1 154 aaPredicted RBP12.21□□□□□ -0.45
CHD4-211ENST00000544484 PPP6CO00743 305 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 PYCR1P32322 319 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 ENTPD1P49961 510 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 TSC22D1Q15714 1073 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 AAK1Q2M2I8 961 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 FAM69BQ5VUD6 431 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 SYCE2Q6PIF2 218 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 SAMD12Q8N8I0 201 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 OR7G3Q8NG95 312 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 CIDECQ96AQ7 238 aaPredicted RBP12.21□□□□□ -0.45
CHD4-211ENST00000544484 ECHDC3Q96DC8 303 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 S100A16Q96FQ6 103 aaKnown RBP12.21□□□□□ -0.45
CHD4-211ENST00000544484 RDH12Q96NR8 316 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 CXCL16Q9H2A7 254 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 TAS2R10Q9NYW0 307 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 PPP4R1LQ9P1A2 415 aa12.21□□□□□ -0.45
CHD4-211ENST00000544484 TOPAZ1Q8N9V7 1692 aa12.21□□□□□ -0.46
CHD4-211ENST00000544484 FXYD6-FXYD2A0A087WZ82 144 aa12.21□□□□□ -0.46
CHD4-211ENST00000544484 FOXD2O60548 495 aaPredicted RBP12.21□□□□□ -0.46
CHD4-211ENST00000544484 PTGER1P34995 402 aa12.21□□□□□ -0.46
CHD4-211ENST00000544484 NSDHLQ15738 373 aa12.21□□□□□ -0.46
CHD4-211ENST00000544484 UNC5DQ6UXZ4 953 aa12.21□□□□□ -0.46
CHD4-211ENST00000544484 ZNF852Q6ZMS4 543 aa12.21□□□□□ -0.46
CHD4-211ENST00000544484 OR56A3Q8NH54 315 aa12.21□□□□□ -0.46
CHD4-211ENST00000544484 NEIL3Q8TAT5 605 aa12.21□□□□□ -0.46
CHD4-211ENST00000544484 GATAD2BQ8WXI9 593 aa12.21□□□□□ -0.46
CHD4-211ENST00000544484 LRR1Q96L50 414 aa12.21□□□□□ -0.46
CHD4-211ENST00000544484 FXYD6Q9H0Q3 95 aa12.21□□□□□ -0.46
CHD4-211ENST00000544484 SEC14L4Q9UDX3 406 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms