RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 SFXN3Q9BWM7 321 aa16.68■□□□□ 0.26
RAP1B-229ENST00000543393 ROGDIQ9GZN7 287 aa16.68■□□□□ 0.26
RAP1B-229ENST00000543393 WWTR1Q9GZV5 400 aa16.68■□□□□ 0.26
RAP1B-229ENST00000543393 UBTD1Q9HAC8 227 aa16.68■□□□□ 0.26
RAP1B-229ENST00000543393 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.68■□□□□ 0.26
RAP1B-229ENST00000543393 C15orf41Q9Y2V0 281 aa16.68■□□□□ 0.26
RAP1B-229ENST00000543393 MED12LQ86YW9 2145 aa16.67■□□□□ 0.26
RAP1B-229ENST00000543393 IQANK1A0A1B0GTG1 560 aa16.67■□□□□ 0.26
RAP1B-229ENST00000543393 PRAMEF4O60810 478 aa16.67■□□□□ 0.26
RAP1B-229ENST00000543393 SNX4O95219 450 aa16.67■□□□□ 0.26
RAP1B-229ENST00000543393 CNOT4O95628 575 aaKnown RBP16.67■□□□□ 0.26
RAP1B-229ENST00000543393 PTMSP20962 102 aa16.67■□□□□ 0.26
RAP1B-229ENST00000543393 FPR1P21462 350 aa16.67■□□□□ 0.26
RAP1B-229ENST00000543393 MASP1P48740 699 aa16.67■□□□□ 0.26
RAP1B-229ENST00000543393 FBXW4P57775 412 aa16.67■□□□□ 0.26
RAP1B-229ENST00000543393 HERVK_113P63132 956 aa16.67■□□□□ 0.26
RAP1B-229ENST00000543393 ERVK-8P63133 956 aa16.67■□□□□ 0.26
RAP1B-229ENST00000543393 PLIN5Q00G26 463 aa16.67■□□□□ 0.26
RAP1B-229ENST00000543393 ACKR1Q16570 336 aa16.67■□□□□ 0.26
RAP1B-229ENST00000543393 WIPI1Q5MNZ9 446 aaPredicted RBP16.67■□□□□ 0.26
RAP1B-229ENST00000543393 TEDDM1Q5T9Z0 273 aa16.67■□□□□ 0.26
RAP1B-229ENST00000543393 PRAMEF9Q5VWM5 478 aa16.67■□□□□ 0.26
RAP1B-229ENST00000543393 TMEM64Q6YI46 380 aa16.67■□□□□ 0.26
RAP1B-229ENST00000543393 BBOF1Q8ND07 529 aa16.67■□□□□ 0.26
RAP1B-229ENST00000543393 PPP1R14CQ8TAE6 165 aa16.67■□□□□ 0.26
RAP1B-229ENST00000543393 ANKRD7Q92527 254 aa16.67■□□□□ 0.26
RAP1B-229ENST00000543393 NTNG2Q96CW9 530 aa16.67■□□□□ 0.26
RAP1B-229ENST00000543393 CERS2Q96G23 380 aa16.67■□□□□ 0.26
RAP1B-229ENST00000543393 TBCDQ9BTW9 1192 aa16.67■□□□□ 0.26
RAP1B-229ENST00000543393 ERVK-6Q9BXR3 956 aa16.67■□□□□ 0.26
RAP1B-229ENST00000543393 RYDENQ9NUL5 291 aaKnown RBP16.67■□□□□ 0.26
RAP1B-229ENST00000543393 GPRC5BQ9NZH0 403 aa16.67■□□□□ 0.26
RAP1B-229ENST00000543393 CORO1CQ9ULV4 474 aaPredicted RBP16.67■□□□□ 0.26
RAP1B-229ENST00000543393 ERVK-19Q9WJR5 959 aa16.67■□□□□ 0.26
RAP1B-229ENST00000543393 RNF212BA8MTL3 300 aa16.66■□□□□ 0.26
RAP1B-229ENST00000543393 DEFB108AA8MXU0 73 aa16.66■□□□□ 0.26
RAP1B-229ENST00000543393 TP53I11O14683 189 aa16.66■□□□□ 0.26
RAP1B-229ENST00000543393 CTIFO43310 598 aaKnown RBP16.66■□□□□ 0.26
RAP1B-229ENST00000543393 BANF1O75531 89 aa16.66■□□□□ 0.26
RAP1B-229ENST00000543393 TTC4O95801 387 aa16.66■□□□□ 0.26
RAP1B-229ENST00000543393 CYP4B1P13584 511 aa16.66■□□□□ 0.26
RAP1B-229ENST00000543393 HIST1H1TP22492 207 aaPredicted RBP16.66■□□□□ 0.26
RAP1B-229ENST00000543393 CXCR5P32302 372 aa16.66■□□□□ 0.26
RAP1B-229ENST00000543393 NAGLUP54802 743 aa16.66■□□□□ 0.26
RAP1B-229ENST00000543393 EBPQ15125 230 aaKnown RBP16.66■□□□□ 0.26
RAP1B-229ENST00000543393 RPS6KA2Q15349 733 aa16.66■□□□□ 0.26
RAP1B-229ENST00000543393 SPANXN3Q5MJ09 141 aa16.66■□□□□ 0.26
RAP1B-229ENST00000543393 RNF111Q6ZNA4 994 aa16.66■□□□□ 0.26
RAP1B-229ENST00000543393 FRA10AC1Q70Z53 315 aa16.66■□□□□ 0.26
RAP1B-229ENST00000543393 PACS2Q86VP3 889 aa16.66■□□□□ 0.26
RAP1B-229ENST00000543393 HEATR5AQ86XA9 2040 aa16.66■□□□□ 0.26
RAP1B-229ENST00000543393 TAGAPQ8N103 731 aa16.66■□□□□ 0.26
RAP1B-229ENST00000543393 SRFBP1Q8NEF9 429 aaKnown RBP16.66■□□□□ 0.26
RAP1B-229ENST00000543393 SPPL2AQ8TCT8 520 aa16.66■□□□□ 0.26
RAP1B-229ENST00000543393 INTS12Q96CB8 462 aaKnown RBP16.66■□□□□ 0.26
RAP1B-229ENST00000543393 ZFP3Q96NJ6 502 aa16.66■□□□□ 0.26
RAP1B-229ENST00000543393 TUBA1CQ9BQE3 449 aa16.66■□□□□ 0.26
RAP1B-229ENST00000543393 CAPS2Q9BXY5 557 aa16.66■□□□□ 0.26
RAP1B-229ENST00000543393 ANGPTL4Q9BY76 406 aa16.66■□□□□ 0.26
RAP1B-229ENST00000543393 EHD1Q9H4M9 534 aa16.66■□□□□ 0.26
RAP1B-229ENST00000543393 PPANQ9NQ55 473 aaKnown RBP16.66■□□□□ 0.26
RAP1B-229ENST00000543393 ANK3Q12955 4377 aaKnown RBP16.66■□□□□ 0.26
RAP1B-229ENST00000543393 SONP18583 2426 aaKnown RBP16.66■□□□□ 0.26
RAP1B-229ENST00000543393 RAI1Q7Z5J4 1906 aaPredicted RBP16.65■□□□□ 0.26
RAP1B-229ENST00000543393 NCF1BA6NI72 391 aaPredicted RBP16.65■□□□□ 0.26
RAP1B-229ENST00000543393 NCF1CA8MVU1 366 aaPredicted RBP16.65■□□□□ 0.26
RAP1B-229ENST00000543393 A8MXE2 369 aa16.65■□□□□ 0.26
RAP1B-229ENST00000543393 CLGNO14967 610 aa16.65■□□□□ 0.26
RAP1B-229ENST00000543393 RCBTB2O95199 551 aa16.65■□□□□ 0.26
RAP1B-229ENST00000543393 NCF1P14598 390 aaPredicted RBP16.65■□□□□ 0.26
RAP1B-229ENST00000543393 ALOX15P16050 662 aaPredicted RBP16.65■□□□□ 0.26
RAP1B-229ENST00000543393 CD22P20273 847 aa16.65■□□□□ 0.26
RAP1B-229ENST00000543393 SLC37A1P57057 533 aa16.65■□□□□ 0.26
RAP1B-229ENST00000543393 DOC2AQ14183 400 aa16.65■□□□□ 0.26
RAP1B-229ENST00000543393 ZNF267Q14586 743 aaPredicted RBP16.65■□□□□ 0.26
RAP1B-229ENST00000543393 ZNF460Q14592 562 aa16.65■□□□□ 0.26
RAP1B-229ENST00000543393 TSNQ15631 228 aaKnown RBP16.65■□□□□ 0.26
RAP1B-229ENST00000543393 PLXDC2Q6UX71 529 aa16.65■□□□□ 0.26
RAP1B-229ENST00000543393 PHC2Q8IXK0 858 aa16.65■□□□□ 0.26
RAP1B-229ENST00000543393 NKAPQ8N5F7 415 aaKnown RBP16.65■□□□□ 0.26
RAP1B-229ENST00000543393 MAGOHBQ96A72 148 aaKnown RBP16.65■□□□□ 0.26
RAP1B-229ENST00000543393 PTCD3Q96EY7 689 aaKnown RBP16.65■□□□□ 0.26
RAP1B-229ENST00000543393 PIK3IP1Q96FE7 263 aa16.65■□□□□ 0.26
RAP1B-229ENST00000543393 TM9SF2Q99805 663 aa16.65■□□□□ 0.26
RAP1B-229ENST00000543393 MS4A8Q9BY19 250 aa16.65■□□□□ 0.26
RAP1B-229ENST00000543393 PIGMQ9H3S5 423 aa16.65■□□□□ 0.26
RAP1B-229ENST00000543393 RPF2Q9H7B2 306 aaKnown RBP16.65■□□□□ 0.26
RAP1B-229ENST00000543393 TEX10Q9NXF1 929 aaPredicted RBP16.65■□□□□ 0.26
RAP1B-229ENST00000543393 CAPN14A8MX76 684 aa16.64■□□□□ 0.25
RAP1B-229ENST00000543393 GNB5O14775 395 aa16.64■□□□□ 0.25
RAP1B-229ENST00000543393 SH3BGRLO75368 114 aa16.64■□□□□ 0.25
RAP1B-229ENST00000543393 SCELO95171 688 aa16.64■□□□□ 0.25
RAP1B-229ENST00000543393 ACTL6AO96019 429 aa16.64■□□□□ 0.25
RAP1B-229ENST00000543393 CPOXP36551 454 aa16.64■□□□□ 0.25
RAP1B-229ENST00000543393 CASP3P42574 277 aa16.64■□□□□ 0.25
RAP1B-229ENST00000543393 DIO3P55073 304 aa16.64■□□□□ 0.25
RAP1B-229ENST00000543393 BIKQ13323 160 aa16.64■□□□□ 0.25
RAP1B-229ENST00000543393 SPRED3Q2MJR0 410 aa16.64■□□□□ 0.25
RAP1B-229ENST00000543393 AP5B1Q2VPB7 878 aa16.64■□□□□ 0.25
RAP1B-229ENST00000543393 FBXO48Q5FWF7 155 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms