RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 LRTM1Q9HBL6 345 aa12.81□□□□□ -0.36
TNFSF13B-206ENST00000542136 NKIRAS1Q9NYS0 192 aa12.81□□□□□ -0.36
TNFSF13B-206ENST00000542136 MYOTQ9UBF9 498 aa12.81□□□□□ -0.36
TNFSF13B-206ENST00000542136 ZDHHC2Q9UIJ5 367 aa12.81□□□□□ -0.36
TNFSF13B-206ENST00000542136 RAP2CQ9Y3L5 183 aa12.81□□□□□ -0.36
TNFSF13B-206ENST00000542136 ZNF780BQ9Y6R6 833 aa12.81□□□□□ -0.36
TNFSF13B-206ENST00000542136 TMEM200CA6NKL6 621 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 J3QKU1 62 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 LSM1O15116 133 aaKnown RBP12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 PRAMEF2O60811 474 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 PRKRAO75569 313 aaKnown RBP12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 HSPA4LO95757 839 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 LINC00032P0C843 101 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 DDCP20711 480 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 SLC1A6P48664 564 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 CYB561P49447 251 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 WDR4P57081 412 aaKnown RBP12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 RNF4P78317 190 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 FOXK1P85037 733 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 ID2Q02363 134 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 STX3Q13277 289 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 INPP5JQ15735 1006 aaPredicted RBP12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 XKR7Q5GH72 579 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 FAM71E1Q6IPT2 247 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 TRIM42Q8IWZ5 723 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 GALNT12Q8IXK2 581 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 LRRC34Q8IZ02 419 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 SLC15A4Q8N697 577 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 MDS2Q8NDY4 140 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 CATSPER1Q8NEC5 780 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 C17orf47Q8NEP4 570 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 UCN3Q969E3 161 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 PPWD1Q96BP3 646 aaKnown RBP12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 CTHRC1Q96CG8 243 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 ATP6V1G3Q96LB4 118 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 PPP3R2Q96LZ3 170 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 SH3GL2Q99962 352 aa12.8□□□□□ -0.36
TNFSF13B-206ENST00000542136 GABRR3A8MPY1 467 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 TBX19O60806 448 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 SLITRK5O94991 958 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 IL3P08700 152 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 IFI6P09912 130 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 MPIP34949 423 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 ASMTP46597 345 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 RPL14P50914 215 aaKnown RBP12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 SSR4P51571 173 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 SLC37A1P57057 533 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 BTKQ06187 659 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 ZNF267Q14586 743 aaPredicted RBP12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 NR6A1Q15406 480 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 RFTN2Q52LD8 501 aaPredicted RBP12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 CES4AQ5XG92 561 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 DDIASQ8IXT1 998 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 DND1Q8IYX4 353 aaKnown RBP12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 LRRC25Q8N386 305 aaPredicted RBP12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 AMER2Q8N7J2 671 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 OR2T11Q8NH01 316 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 DNAJB8Q8NHS0 232 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 CPT1CQ8TCG5 803 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 ZNF675Q8TD23 568 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 TP53INP1Q96A56 240 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 MIB2Q96AX9 1013 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 MTERF3Q96E29 417 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 SLC35C2Q9NQQ7 365 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 THAP1Q9NVV9 213 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 PLA2G3Q9NZ20 509 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 HEY2Q9UBP5 337 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 ZNF639Q9UID6 485 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 UTS2RQ9UKP6 389 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 CSAG2Q9Y5P2 127 aa12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 COPG1Q9Y678 874 aaKnown RBP12.79□□□□□ -0.36
TNFSF13B-206ENST00000542136 MYOCOSA0A1B0GUC4 107 aa12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 WDR91A4D1P6 747 aa12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 HMGB1P1B2RPK0 211 aaPredicted RBP12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 TMEM233B4DJY2 109 aa12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 KLF11O14901 512 aa12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 PIP5K1BO14986 540 aa12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 ITM2AO43736 263 aa12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 ITGA10O75578 1167 aa12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 BCAS2O75934 225 aaPredicted RBP12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 NEURL1O76050 574 aa12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 CD46P15529 392 aa12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 S1PR1P21453 382 aa12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 MAPK1P28482 360 aa12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 ALDH9A1P49189 494 aa12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 HK2P52789 917 aa12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 C2orf80Q0P641 193 aa12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 MGAT2Q10469 447 aa12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 MAD2L1Q13257 205 aaPredicted RBP12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 OR1C1Q15619 314 aa12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 PRICKLE4Q2TBC4 344 aa12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 PIGGQ5H8A4 983 aa12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 C6orf163Q5TEZ5 329 aa12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 FAM219BQ5XKK7 198 aa12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 ATG16L1Q676U5 607 aa12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 FCRLBQ6BAA4 426 aa12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 RNF111Q6ZNA4 994 aa12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 DGAT2L6Q6ZPD8 337 aa12.78□□□□□ -0.36
TNFSF13B-206ENST00000542136 SLC29A4Q7RTT9 530 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms