RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 SRRQ9GZT4 340 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 ABCG4Q9H172 646 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 IPPKQ9H8X2 491 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 TMEM9BQ9NQ34 198 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 SEMA4GQ9NTN9 838 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 HPF1Q9NWY4 346 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 NDRG4Q9ULP0 352 aaKnown RBP8.29□□□□□ -1.08
DDB1-217ENST00000540166 POFUT2Q9Y2G5 429 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 SPIN1Q9Y657 262 aaPredicted RBP8.29□□□□□ -1.08
DDB1-217ENST00000540166 A0A1W2PPL8 197 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 PRSS44E7EML9 344 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 RAF1P04049 648 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 RHOCP08134 193 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 EPHA2P29317 976 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 LCN1P31025 176 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 MPLP40238 635 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 SOX3P41225 446 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 HOXC5Q00444 222 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 NFKB2Q00653 900 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 NKG7Q16617 165 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 SWI5Q1ZZU3 235 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 RSPO4Q2I0M5 234 aaPredicted RBP8.29□□□□□ -1.08
DDB1-217ENST00000540166 CARD16Q5EG05 197 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 SAXO2Q658L1 398 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 GDPGP1Q6ZNW5 385 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 ARHGAP12Q8IWW6 846 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 RDH10Q8IZV5 341 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 LGI4Q8N135 537 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 OR7G3Q8NG95 312 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 COQ8AQ8NI60 647 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 RHEBL1Q8TAI7 183 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 NELL1Q92832 810 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 FEVQ99581 238 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 GPR174Q9BXC1 333 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 BRINP2Q9C0B6 783 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 BTBD1Q9H0C5 482 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 TAS2R16Q9NYV7 291 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 STUB1Q9UNE7 303 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 HS3ST4Q9Y661 456 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 KPNA5O15131 536 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 CYP17A1P05093 508 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 TSPAN5P62079 268 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 PPP3R1P63098 170 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 PCDH1Q08174 1060 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 TNK1Q13470 666 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 LARS2Q15031 903 aaKnown RBP8.29□□□□□ -1.08
DDB1-217ENST00000540166 KDM4DQ6B0I6 523 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 DLEU7Q6UYE1 221 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 IKBIPQ70UQ0 350 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 B3GNT7Q8NFL0 401 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 MARVELD3Q96A59 401 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 PLD4Q96BZ4 506 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 NXPE2Q96DL1 559 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 OR5M11Q96RB7 305 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 C12orf57Q99622 126 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 PDCD10Q9BUL8 212 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 NLNQ9BYT8 704 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 GSX2Q9BZM3 304 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 ATG2BQ96BY7 2078 aa8.29□□□□□ -1.08
DDB1-217ENST00000540166 LINC00862A6NCI5 91 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 FAM220BPB1ANY3 271 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 L7N2F9 121 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 MUSKO15146 869 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 PRSS56P0CW18 603 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 PKMP14618 531 aaKnown RBP8.28□□□□□ -1.08
DDB1-217ENST00000540166 GGT2P36268 569 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 ALDH9A1P49189 494 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 B2MP61769 119 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 PSPHP78330 225 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 RIPPLY1Q0D2K3 151 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 FOXC1Q12948 553 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 SGCGQ13326 291 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 PCM1Q15154 2024 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 SPDYE7PQ495Y7 208 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 LAIR2Q6ISS4 152 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 RETSATQ6NUM9 610 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 ASCL5Q7RTU5 278 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 CFAP52Q8N1V2 620 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 DENND6BQ8NEG7 585 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 TTLQ8NG68 377 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 OR14C36Q8NHC7 312 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 DNAJB8Q8NHS0 232 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 CREB3L1Q96BA8 519 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 CDKN2AIPNLQ96HQ2 116 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 CCM2Q9BSQ5 444 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 AARSD1Q9BTE6 412 aaKnown RBP8.28□□□□□ -1.08
DDB1-217ENST00000540166 ABCG5Q9H222 651 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 CARS2Q9HA77 564 aaKnown RBP8.28□□□□□ -1.08
DDB1-217ENST00000540166 SCML2Q9UQR0 700 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 PRKAB1Q9Y478 270 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 ARID2Q68CP9 1835 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 CBX4O00257 560 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 NIPSNAP2O75323 286 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 PAHP00439 452 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 ESR1P03372 595 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 CSF3P09919 207 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 APEX1P27695 318 aaKnown RBP8.28□□□□□ -1.08
DDB1-217ENST00000540166 CD6P30203 668 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 MAGEA2P43356 314 aa8.28□□□□□ -1.08
DDB1-217ENST00000540166 SRSF5Q13243 272 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms