RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 FAM72CH0Y354 149 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 F7P08709 466 aaPredicted RBP6.2□□□□□ -1.42
LSAMP-207ENST00000539563 SLC10A2Q12908 348 aaPredicted RBP6.2□□□□□ -1.42
LSAMP-207ENST00000539563 TCTE1Q5JU00 501 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 FAM72AQ5TYM5 149 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 FAM72DQ6L9T8 149 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 BLOC1S3Q6QNY0 202 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 TMEM107Q6UX40 140 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 FAM72BQ86X60 149 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.2□□□□□ -1.42
LSAMP-207ENST00000539563 ZNF283Q8N7M2 679 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 NEIL3Q8TAT5 605 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 TGM7Q96PF1 710 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 ENAMQ9NRM1 1142 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 RXFP3Q9NSD7 469 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 C2orf42Q9NWW7 574 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 MYH14Q7Z406 1995 aaKnown RBP6.2□□□□□ -1.42
LSAMP-207ENST00000539563 MT-ND2P03891 347 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 DRD1P21728 446 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 VAMP1P23763 118 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 GABARAPL2P60520 117 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 PHC1P78364 1004 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 BNIP3Q12983 259 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 HNRNPA0Q13151 305 aaKnown RBP6.2□□□□□ -1.42
LSAMP-207ENST00000539563 SERTAD2Q14140 314 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 GAS6Q14393 721 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 GRB7Q14451 532 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 TCEAL3Q969E4 200 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 SGTBQ96EQ0 304 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 GPR62Q9BZJ7 368 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 PSAT1Q9Y617 370 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 SLC33A1O00400 549 aaPredicted RBP6.2□□□□□ -1.42
LSAMP-207ENST00000539563 LSM1O15116 133 aaKnown RBP6.2□□□□□ -1.42
LSAMP-207ENST00000539563 JRKO75564 520 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 SRCP12931 536 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 ZNF182P17025 639 aaPredicted RBP6.2□□□□□ -1.42
LSAMP-207ENST00000539563 FDXRP22570 491 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 DEFA5Q01523 94 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 FGL1Q08830 312 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 MALLQ13021 153 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 ELOAQ14241 798 aaKnown RBP6.2□□□□□ -1.42
LSAMP-207ENST00000539563 GRK1Q15835 563 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 ALDH16A1Q8IZ83 802 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 FBXL20Q96IG2 436 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 HSPA12BQ96MM6 686 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 ACTR6Q9GZN1 396 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 KATNBL1Q9H079 304 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 MTHFD2LQ9H903 347 aaPredicted RBP6.2□□□□□ -1.42
LSAMP-207ENST00000539563 SPATA6Q9NWH7 488 aaPredicted RBP6.2□□□□□ -1.42
LSAMP-207ENST00000539563 RHCGQ9UBD6 479 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 SARDHQ9UL12 918 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 FTCDNL1E5RQL4 147 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 C11orf98E9PRG8 122 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 SLC35E2BP0CK96 405 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 RPS15P62841 145 aaKnown RBP6.2□□□□□ -1.42
LSAMP-207ENST00000539563 HSD11B2P80365 405 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 ID2Q02363 134 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 ST3GAL4Q11206 333 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 PPP1R8Q12972 351 aaKnown RBP6.2□□□□□ -1.42
LSAMP-207ENST00000539563 PIGGQ5H8A4 983 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 CATSPEREQ5SY80 951 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 C6orf141Q5SZD1 244 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 EMC10Q5UCC4 262 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 C6orf89Q6UWU4 347 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 KRTCAP2Q8N6L1 136 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 RELTQ969Z4 430 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 DDIT4LQ96D03 193 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 SGIP1Q9BQI5 828 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 ARHGAP9Q9BRR9 750 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 TREM1Q9NP99 234 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 H3BSA7 217 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 RAD51DO75771 328 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 ALDOAP04075 364 aaKnown RBP6.2□□□□□ -1.42
LSAMP-207ENST00000539563 C6P13671 934 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 PRKCAP17252 672 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 NDUFV2P19404 249 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 PRKACGP22612 351 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 EXOC3L2Q2M3D2 409 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 CYP27C1Q4G0S4 372 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 MARVELD2Q8N4S9 558 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 OR51G2Q8NGK0 314 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 NECAB3Q96P71 396 aaPredicted RBP6.2□□□□□ -1.42
LSAMP-207ENST00000539563 DEFB126Q9BYW3 111 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 PELI2Q9HAT8 420 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 ABCG2Q9UNQ0 655 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 FXYD6-FXYD2A0A087WZ82 144 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 GXYLT2A0PJZ3 443 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 ELK4P28324 431 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 GGT5P36269 586 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 TAS2R38P59533 333 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 S100A10P60903 97 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 MLLT1Q03111 559 aaPredicted RBP6.2□□□□□ -1.42
LSAMP-207ENST00000539563 PLCXD2Q0VAA5 305 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 KCNAB2Q13303 367 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 SLC14A2Q15849 920 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 TMEM69Q5SWH9 247 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 RAB12Q6IQ22 244 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 C3orf33Q6P1S2 294 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 ZNF584Q8IVC4 421 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 ISOC1Q96CN7 298 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms