RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 NR2F1P10589 423 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 CD247P20963 164 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 TLX1P31314 330 aaPredicted RBP12.84□□□□□ -0.35
SMG6-203ENST00000536871 ACSL1P33121 698 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 POLR2IP36954 125 aaKnown RBP12.84□□□□□ -0.35
SMG6-203ENST00000536871 DGKEP52429 567 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 EMP3P54852 163 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 ANKRD34AQ69YU3 496 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 LAIR2Q6ISS4 152 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 B3GNT8Q7Z7M8 397 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 AVL9Q8NBF6 648 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 OR8K5Q8NH50 307 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 SUN3Q8TAQ9 357 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 FKBP10Q96AY3 582 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 COG8Q96MW5 612 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 SERINC2Q96SA4 455 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 KCNK12Q9HB15 430 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 ZNF624Q9P2J8 865 aaPredicted RBP12.84□□□□□ -0.35
SMG6-203ENST00000536871 MGAT4BQ9UQ53 548 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 SLC9A8Q9Y2E8 581 aa12.84□□□□□ -0.35
SMG6-203ENST00000536871 GPC6Q9Y625 555 aaPredicted RBP12.84□□□□□ -0.35
SMG6-203ENST00000536871 MKI67P46013 3256 aaKnown RBP12.83□□□□□ -0.35
SMG6-203ENST00000536871 A0A1W2PR48 441 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 DUXAA6NLW8 204 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 FAAHO00519 579 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 PROM1O43490 865 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 B4GAT1O43505 415 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 SLITRK5O94991 958 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 VIPP01282 170 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 IFI6P09912 130 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 CDK4P11802 303 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 GABRG2P18507 467 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 AGXTP21549 392 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 PCSK6P29122 969 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 SLC19A1P41440 591 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 OR1E2P47887 323 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 BLKP51451 505 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 CCINQ13939 588 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 LAPTM4AQ15012 233 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 EXOC3L2Q2M3D2 409 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 ABHD13Q7L211 337 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 SLC5A8Q8N695 610 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 ZNF540Q8NDQ6 660 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 CNIH3Q8TBE1 160 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 APOBEC4Q8WW27 367 aaKnown RBP12.83□□□□□ -0.36
SMG6-203ENST00000536871 FAM3CQ92520 227 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 MYDGFQ969H8 173 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 TM4SF19Q96DZ7 209 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 DHRS1Q96LJ7 313 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 ALPK1Q96QP1 1244 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 NRTNQ99748 197 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 AICDAQ9GZX7 198 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 ABCG4Q9H172 646 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 OR51I1Q9H343 314 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 KLHL31Q9H511 634 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 EBF1Q9UH73 591 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 CES1P1Q9UKY3 287 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 CDC14AQ9UNH5 594 aa12.83□□□□□ -0.36
SMG6-203ENST00000536871 GSAPA4D1B5 854 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 C2orf74A8MZ97 194 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 PTGES3LE9PB15 166 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 FAM20BO75063 409 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 AIFM1O95831 613 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 NR2F6P10588 404 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 CYP4B1P13584 511 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 ZNF24P17028 368 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 PCMT1P22061 227 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 CASP9P55211 416 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 CDC42P60953 191 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 NPTX1Q15818 432 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 NDUFA9Q16795 377 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 DUSP7Q16829 419 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 ALG11Q2TAA5 492 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 TMEM92Q6UXU6 159 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 LINC00299Q6ZSB3 139 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 RD3Q7Z3Z2 195 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 ANKRD13BQ86YJ7 626 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 GPBAR1Q8TDU6 330 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 TREX2Q9BQ50 279 aaPredicted RBP12.82□□□□□ -0.36
SMG6-203ENST00000536871 CCDC90BQ9GZT6 254 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 LHPPQ9H008 270 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 ACAD8Q9UKU7 415 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 ATG4BQ9Y4P1 393 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 PCDHGA6Q9Y5G7 932 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 SPACA6W5XKT8 324 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 COL4A2P08572 1712 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 SH3D21A4FU49 640 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 SYT5O00445 386 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 NDUFS2O75306 463 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 ERAL1O75616 437 aaKnown RBP12.82□□□□□ -0.36
SMG6-203ENST00000536871 HTR1AP08908 422 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 CBLP22681 906 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 AK4P27144 223 aaPredicted RBP12.82□□□□□ -0.36
SMG6-203ENST00000536871 IFNA8P32881 189 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 ST13P50502 369 aaKnown RBP12.82□□□□□ -0.36
SMG6-203ENST00000536871 DCST1Q5T197 706 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 ATAD3BQ5T9A4 648 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 KIAA0895LQ68EN5 471 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 Q6ZSR6 202 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 TSACCQ96A04 125 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms