RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 PFKFB4Q16877 469 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 FAM83EQ2M2I3 478 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 SPRED3Q2MJR0 410 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 C1orf185Q5T7R7 199 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 PRAMEF20Q5VT98 475 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 RNF111Q6ZNA4 994 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 TMEM200AQ86VY9 491 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 CENPLQ8N0S6 344 aaPredicted RBP18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 FBXW8Q8N3Y1 598 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 FAM13CQ8NE31 585 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 DOK4Q8TEW6 326 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 ERVK-6Q9BXR3 956 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 ZNF703Q9H7S9 590 aaPredicted RBP18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 ZFP64Q9NPA5 681 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 LYARQ9NX58 379 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 ALKBH4Q9NXW9 302 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 CNIH4Q9P003 139 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 Q9UFV3 132 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 ERVK-19Q9WJR5 959 aa18.13■□□□□ 0.49
TNFRSF1B-204ENST00000536782 NCKAP5O14513 1909 aa18.12■□□□□ 0.49
TNFRSF1B-204ENST00000536782 CCDC189A1A4V9 331 aa18.12■□□□□ 0.49
TNFRSF1B-204ENST00000536782 FAM47E-STBD1D6RA91 191 aa18.12■□□□□ 0.49
TNFRSF1B-204ENST00000536782 H0YIV9 168 aa18.12■□□□□ 0.49
TNFRSF1B-204ENST00000536782 UGDHO60701 494 aa18.12■□□□□ 0.49
TNFRSF1B-204ENST00000536782 FBXO45P0C2W1 286 aa18.12■□□□□ 0.49
TNFRSF1B-204ENST00000536782 GABRA1P14867 456 aa18.12■□□□□ 0.49
TNFRSF1B-204ENST00000536782 ALDH18A1P54886 795 aaKnown RBP18.12■□□□□ 0.49
TNFRSF1B-204ENST00000536782 IRF9Q00978 393 aa18.12■□□□□ 0.49
TNFRSF1B-204ENST00000536782 MRM1Q6IN84 353 aaKnown RBP18.12■□□□□ 0.49
TNFRSF1B-204ENST00000536782 CYP20A1Q6UW02 462 aa18.12■□□□□ 0.49
TNFRSF1B-204ENST00000536782 C17orf53Q8N3J3 647 aaPredicted RBP18.12■□□□□ 0.49
TNFRSF1B-204ENST00000536782 MYRIPQ8NFW9 859 aa18.12■□□□□ 0.49
TNFRSF1B-204ENST00000536782 RIT1Q92963 219 aa18.12■□□□□ 0.49
TNFRSF1B-204ENST00000536782 ZNF717Q9BY31 904 aaPredicted RBP18.12■□□□□ 0.49
TNFRSF1B-204ENST00000536782 WDR41Q9HAD4 459 aa18.12■□□□□ 0.49
TNFRSF1B-204ENST00000536782 SPRR3Q9UBC9 169 aa18.12■□□□□ 0.49
TNFRSF1B-204ENST00000536782 ASB4Q9Y574 426 aa18.12■□□□□ 0.49
TNFRSF1B-204ENST00000536782 CHCHD2Q9Y6H1 151 aaPredicted RBP18.12■□□□□ 0.49
TNFRSF1B-204ENST00000536782 ACANP16112 2415 aa18.12■□□□□ 0.49
TNFRSF1B-204ENST00000536782 NAV3Q8IVL0 2385 aa18.11■□□□□ 0.49
TNFRSF1B-204ENST00000536782 A0A0A6YYD5 115 aa18.11■□□□□ 0.49
TNFRSF1B-204ENST00000536782 OR6C76A6NM76 312 aa18.11■□□□□ 0.49
TNFRSF1B-204ENST00000536782 EEDO75530 441 aaKnown RBP18.11■□□□□ 0.49
TNFRSF1B-204ENST00000536782 C2P06681 752 aa18.11■□□□□ 0.49
TNFRSF1B-204ENST00000536782 RFPL3SP0C7P2 107 aa18.11■□□□□ 0.49
TNFRSF1B-204ENST00000536782 NR2F6P10588 404 aa18.11■□□□□ 0.49
TNFRSF1B-204ENST00000536782 ENDOUP21128 410 aaKnown RBP18.11■□□□□ 0.49
TNFRSF1B-204ENST00000536782 BSGP35613 385 aa18.11■□□□□ 0.49
TNFRSF1B-204ENST00000536782 CUL3Q13618 768 aa18.11■□□□□ 0.49
TNFRSF1B-204ENST00000536782 ACAP2Q15057 778 aa18.11■□□□□ 0.49
TNFRSF1B-204ENST00000536782 TRADDQ15628 312 aa18.11■□□□□ 0.49
TNFRSF1B-204ENST00000536782 CPSF6Q16630 551 aaKnown RBP eCLIP18.11■□□□□ 0.49
TNFRSF1B-204ENST00000536782 MROH9Q5TGP6 573 aa18.11■□□□□ 0.49
TNFRSF1B-204ENST00000536782 ZDHHC24Q6UX98 284 aa18.11■□□□□ 0.49
TNFRSF1B-204ENST00000536782 LRRC25Q8N386 305 aaPredicted RBP18.11■□□□□ 0.49
TNFRSF1B-204ENST00000536782 OR10G3Q8NGC4 313 aa18.11■□□□□ 0.49
TNFRSF1B-204ENST00000536782 JSRP1Q96MG2 331 aaPredicted RBP18.11■□□□□ 0.49
TNFRSF1B-204ENST00000536782 WWTR1Q9GZV5 400 aa18.11■□□□□ 0.49
TNFRSF1B-204ENST00000536782 DDX31Q9H8H2 851 aaKnown RBP18.11■□□□□ 0.49
TNFRSF1B-204ENST00000536782 IPPKQ9H8X2 491 aa18.11■□□□□ 0.49
TNFRSF1B-204ENST00000536782 QPCTLQ9NXS2 382 aa18.11■□□□□ 0.49
TNFRSF1B-204ENST00000536782 ARHGAP21Q5T5U3 1957 aa18.11■□□□□ 0.49
TNFRSF1B-204ENST00000536782 HRNRQ86YZ3 2850 aaPredicted RBP18.11■□□□□ 0.49
TNFRSF1B-204ENST00000536782 ZNF469Q96JG9 3925 aaPredicted RBP18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 NINQ8N4C6 2090 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 A0A1W2PR48 441 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 GLOD5A6NK44 160 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 WASHC1A8K0Z3 465 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 TMPRSS11DO60235 418 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 ZWINTO95229 277 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 FAM58BPP0C7Q3 252 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 GALNSP34059 522 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 ADH7P40394 386 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 PIK3CGP48736 1102 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 SLC37A1P57057 533 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 GUCY2DQ02846 1103 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 GTF2H2Q13888 395 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 EBPQ15125 230 aaKnown RBP18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 PCBP2Q15366 365 aaKnown RBP eCLIP18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 SLC25A35Q3KQZ1 300 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 GTF2H2CQ6P1K8 395 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 KLC3Q6P597 504 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 SYT10Q6XYQ8 523 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 GOLGA7Q7Z5G4 137 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 NUDT13Q86X67 352 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 LIX1LQ8IVB5 337 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 TAGAPQ8N103 731 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 MRRFQ96E11 262 aaKnown RBP18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 DOHHQ9BU89 302 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 PROK2Q9HC23 129 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 ACKR4Q9NPB9 350 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 SNX15Q9NRS6 342 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 PSD3Q9NYI0 1048 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 B4GALT7Q9UBV7 327 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 PCDHGB3Q9Y5G1 929 aa18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 TNPO3Q9Y5L0 923 aaKnown RBP18.1■□□□□ 0.49
TNFRSF1B-204ENST00000536782 PRRC2AP48634 2157 aaKnown RBP18.09■□□□□ 0.49
TNFRSF1B-204ENST00000536782 LRRC14BA6NHZ5 514 aa18.09■□□□□ 0.49
TNFRSF1B-204ENST00000536782 LRRC3CA6NJW4 275 aa18.09■□□□□ 0.49
TNFRSF1B-204ENST00000536782 KLHL2O95198 593 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms