RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 ANKLE1Q8NAG6 615 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 RBCK1Q9BYM8 510 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 TBCCD1Q9NVR7 557 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 DKK3Q9UBP4 350 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 MYO10Q9HD67 2058 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 SH3PXD2BA1X283 911 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 ZNF701M0R085 212 aaPredicted RBP14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 LILRB3O75022 631 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 APOL3O95236 402 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 MT-ND5P03915 603 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 TACR1P25103 407 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 GCGRP47871 477 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 BCAP31P51572 246 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 PPP3R1P63098 170 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 KEAP1Q14145 624 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 MRPL58Q14197 206 aaKnown RBP14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 LIPKQ5VXJ0 399 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 AFMIDQ63HM1 303 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 RFLNAQ6ZTI6 216 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 LRR1Q96L50 414 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 FBRSQ9HAH7 460 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 MYNNQ9NPC7 610 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 PCDHGA8Q9Y5G5 932 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 C1orf105O95561 183 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 GNSP15586 552 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 HK1P19367 917 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 DDCP20711 480 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 EDNRAP25101 427 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 ZNF550Q7Z398 422 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 PSD4Q8NDX1 1056 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 OR2L2Q8NH16 312 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 FANK1Q8TC84 345 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 UBTD2Q8WUN7 234 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 RELTQ969Z4 430 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 GPR83Q9NYM4 423 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 SARDHQ9UL12 918 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 HCFC2Q9Y5Z7 792 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 AP1M2Q9Y6Q5 423 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 PRAMEF33A0A0G2JMD5 474 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 TCRBV21S2A2A0A5A6 115 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 SH3D21A4FU49 640 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 PROM1O43490 865 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 PRAMEF10O60809 474 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 SEMA3DO95025 777 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 TFPTP0C1Z6 253 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 CNR2P34972 360 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 TAS2R43P59537 309 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 DUS1LQ6P1R4 473 aaKnown RBP14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 LINGO2Q7L985 606 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 ZNF548Q8NEK5 533 aaPredicted RBP14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 NPLQ9BXD5 320 aaPredicted RBP14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 PRTFDC1Q9NRG1 225 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 SSC5DA1L4H1 1573 aa14.59□□□□□ -0.07
PCDHA3-202ENST00000532566 IQCMA0A1B0GVH7 501 aa14.58□□□□□ -0.07
PCDHA3-202ENST00000532566 CLCA1A8K7I4 914 aa14.58□□□□□ -0.07
PCDHA3-202ENST00000532566 ZNF879B4DU55 563 aa14.58□□□□□ -0.07
PCDHA3-202ENST00000532566 SLITRK5O94991 958 aa14.58□□□□□ -0.07
PCDHA3-202ENST00000532566 LDOC1O95751 146 aaPredicted RBP14.58□□□□□ -0.07
PCDHA3-202ENST00000532566 GNALP38405 381 aa14.58□□□□□ -0.07
PCDHA3-202ENST00000532566 GK3PQ14409 553 aa14.58□□□□□ -0.07
PCDHA3-202ENST00000532566 MICAQ29983 383 aa14.58□□□□□ -0.07
PCDHA3-202ENST00000532566 KRT77Q7Z794 578 aa14.58□□□□□ -0.07
PCDHA3-202ENST00000532566 RNF175Q8N4F7 328 aa14.58□□□□□ -0.07
PCDHA3-202ENST00000532566 FNDC8Q8TC99 324 aa14.58□□□□□ -0.07
PCDHA3-202ENST00000532566 WFDC5Q8TCV5 224 aa14.58□□□□□ -0.07
PCDHA3-202ENST00000532566 FGF13Q92913 245 aa14.58□□□□□ -0.07
PCDHA3-202ENST00000532566 TSACCQ96A04 125 aaPredicted RBP14.58□□□□□ -0.07
PCDHA3-202ENST00000532566 ZNF583Q96ND8 569 aa14.58□□□□□ -0.07
PCDHA3-202ENST00000532566 LGR4Q9BXB1 951 aa14.58□□□□□ -0.07
PCDHA3-202ENST00000532566 OR8D2Q9GZM6 311 aa14.58□□□□□ -0.07
PCDHA3-202ENST00000532566 DNMT3BQ9UBC3 853 aaKnown RBP14.58□□□□□ -0.07
PCDHA3-202ENST00000532566 SMIM30A4D0T7 59 aa14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 FAM172BPA6NC97 362 aa14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 TLX3O43711 291 aaPredicted RBP14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 TRIM3O75382 744 aaPredicted RBP14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 TFAP2AP05549 437 aa14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 ZDHHC11BP0C7U3 371 aa14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 PORP16435 677 aaPredicted RBP14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 TCEA1P23193 301 aaKnown RBP14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 SIM1P81133 766 aaPredicted RBP14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 BORAQ6PGQ7 559 aa14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 CSNK1A1LQ8N752 337 aa14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 OR9Q2Q8NGE9 314 aa14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 MMABQ96EY8 250 aaPredicted RBP14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 DMRTB1Q96MA1 342 aa14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 CYP8B1Q9UNU6 501 aa14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 DNMT3AQ9Y6K1 912 aaPredicted RBP14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 A0A0G2JPF8 293 aa14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 HNRNPCL3B7ZW38 293 aa14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 IGLV3-27P01718 113 aa14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 HNRNPCL4P0DMR1 293 aa14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 S100A1P23297 94 aa14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 HNRNPA0Q13151 305 aaKnown RBP14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 C1orf61Q13536 156 aa14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 ARHGAP40Q5TG30 622 aa14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 C1orf216Q8TAB5 229 aa14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 TUBB1Q9H4B7 451 aa14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 H3BMQ9 156 aa14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 DLGAP1O14490 977 aa14.58□□□□□ -0.08
PCDHA3-202ENST00000532566 OSMP13725 252 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms