RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 TIMM50Q3ZCQ8 353 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 KANK2Q63ZY3 851 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 ATG14Q6ZNE5 492 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 CXXC5Q7LFL8 322 aaKnown RBP7.56□□□□□ -1.2
CTNND1-230ENST00000532245 VWA5B2Q8N398 1253 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 RSC1A1Q92681 617 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 RFKQ969G6 155 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 CENPNQ96H22 339 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-230ENST00000532245 SFXN2Q96NB2 322 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 DPH2Q9BQC3 489 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-230ENST00000532245 C1GALT1Q9NS00 363 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 WSB2Q9NYS7 404 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-230ENST00000532245 VSTM2BA6NLU5 285 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 TOR1BO14657 336 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 HAT1O14929 419 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 ZNF749O43361 778 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 ABOP16442 354 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 RPL34P49207 117 aaKnown RBP7.56□□□□□ -1.2
CTNND1-230ENST00000532245 VASPP50552 380 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-230ENST00000532245 CLCN2P51788 898 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 GPLD1P80108 840 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 VLDLRP98155 873 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 MC1RQ01726 317 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 SMAD2Q15796 467 aaKnown RBP7.56□□□□□ -1.2
CTNND1-230ENST00000532245 LRIT3Q3SXY7 679 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 ARMC4Q5T2S8 1044 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 ZNF57Q68EA5 555 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-230ENST00000532245 AAGABQ6PD74 315 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 IL20RBQ6UXL0 311 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 OR2L3Q8NG85 312 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 NMD3Q96D46 503 aaKnown RBP7.56□□□□□ -1.2
CTNND1-230ENST00000532245 PLGRKTQ9HBL7 147 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 DDX28Q9NUL7 540 aaKnown RBP7.56□□□□□ -1.2
CTNND1-230ENST00000532245 VDAC3Q9Y277 283 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 AP4B1Q9Y6B7 739 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 IRGMA1A4Y4 181 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 INMTO95050 263 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 TNFSF15O95150 251 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 GDF1P27539 372 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 SFTPDP35247 375 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 RPS9P46781 194 aaKnown RBP7.56□□□□□ -1.2
CTNND1-230ENST00000532245 ARFIP1P53367 373 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 RRADP55042 308 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 BNIP1Q12981 228 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 EXOSC7Q15024 291 aaKnown RBP7.56□□□□□ -1.2
CTNND1-230ENST00000532245 KCTD11Q693B1 232 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 DNM1P34Q6PK57 102 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 TOR1AIP2Q8NFQ8 470 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 TANKQ92844 425 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 L3HYPDHQ96EM0 354 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 C1GALT1C1Q96EU7 318 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 COQ7Q99807 217 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 OSBPL11Q9BXB4 747 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 C14orf105Q9NVL8 296 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 EURLQ9NYK6 297 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 MAN2B2Q9Y2E5 1009 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 CYB5AP00167 134 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 NR2C1P13056 603 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 TRAF3Q13114 568 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 NAXEQ8NCW5 288 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 PJA1Q8NG27 643 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 OR2I1PQ8NGU4 316 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 HSPBAP1Q96EW2 488 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 RBP7Q96R05 134 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 CD180Q99467 661 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 SEMA6CQ9H3T2 930 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 MARCH7Q9H992 704 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 MEAF6Q9HAF1 191 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 DNAJB9Q9UBS3 223 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 NENFQ9UMX5 172 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 POMPQ9Y244 141 aa7.56□□□□□ -1.2
CTNND1-230ENST00000532245 H3BML4 177 aa7.55□□□□□ -1.2
CTNND1-230ENST00000532245 VILLO15195 856 aa7.55□□□□□ -1.2
CTNND1-230ENST00000532245 UGDHO60701 494 aa7.55□□□□□ -1.2
CTNND1-230ENST00000532245 RCBTB2O95199 551 aa7.55□□□□□ -1.2
CTNND1-230ENST00000532245 CNR2P34972 360 aa7.55□□□□□ -1.2
CTNND1-230ENST00000532245 FOXA1P55317 472 aa7.55□□□□□ -1.2
CTNND1-230ENST00000532245 LIN52Q52LA3 116 aa7.55□□□□□ -1.2
CTNND1-230ENST00000532245 PDZK1Q5T2W1 519 aa7.55□□□□□ -1.2
CTNND1-230ENST00000532245 ZNF548Q8NEK5 533 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-230ENST00000532245 FAR1Q8WVX9 515 aa7.55□□□□□ -1.2
CTNND1-230ENST00000532245 RADILQ96JH8 1075 aa7.55□□□□□ -1.2
CTNND1-230ENST00000532245 CADM1Q9BY67 442 aaKnown RBP7.55□□□□□ -1.2
CTNND1-230ENST00000532245 FSCN3Q9NQT6 498 aa7.55□□□□□ -1.2
CTNND1-230ENST00000532245 LIPT1Q9Y234 373 aa7.55□□□□□ -1.2
CTNND1-230ENST00000532245 MYH15Q9Y2K3 1946 aa7.55□□□□□ -1.2
CTNND1-230ENST00000532245 A0A1W2PPC1 479 aa7.55□□□□□ -1.2
CTNND1-230ENST00000532245 IMPA1P29218 277 aa7.55□□□□□ -1.2
CTNND1-230ENST00000532245 FOLH1Q04609 750 aa7.55□□□□□ -1.2
CTNND1-230ENST00000532245 KRR1Q13601 381 aaKnown RBP7.55□□□□□ -1.2
CTNND1-230ENST00000532245 RIN1Q13671 783 aa7.55□□□□□ -1.2
CTNND1-230ENST00000532245 WDR53Q7Z5U6 358 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-230ENST00000532245 SLC30A3Q99726 388 aa7.55□□□□□ -1.2
CTNND1-230ENST00000532245 PRRX2Q99811 253 aa7.55□□□□□ -1.2
CTNND1-230ENST00000532245 LRRN3Q9H3W5 708 aa7.55□□□□□ -1.2
CTNND1-230ENST00000532245 THSD1Q9NS62 852 aa7.55□□□□□ -1.2
CTNND1-230ENST00000532245 CLEC4AQ9UMR7 237 aa7.55□□□□□ -1.2
CTNND1-230ENST00000532245 LRCH1Q9Y2L9 728 aa7.55□□□□□ -1.2
CTNND1-230ENST00000532245 FANCGO15287 622 aa7.55□□□□□ -1.2
CTNND1-230ENST00000532245 FARS2O95363 451 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms