RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 WDR41Q9HAD4 459 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 MCCC2Q9HCC0 563 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 KCNJ16Q9NPI9 418 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 SEMA4BQ9NPR2 832 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-207ENST00000531727 NPDC1Q9NQX5 325 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-207ENST00000531727 RYDENQ9NUL5 291 aaKnown RBP15.52■□□□□ 0.08
CPSF1-207ENST00000531727 RNF11Q9Y3C5 154 aa15.52■□□□□ 0.08
CPSF1-207ENST00000531727 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.52■□□□□ 0.08
CPSF1-207ENST00000531727 IQANK1A0A1B0GTG1 560 aa15.51■□□□□ 0.07
CPSF1-207ENST00000531727 NKX2-6A6NCS4 301 aa15.51■□□□□ 0.07
CPSF1-207ENST00000531727 GLOD5A6NK44 160 aa15.51■□□□□ 0.07
CPSF1-207ENST00000531727 FIGNL2A6NMB9 653 aa15.51■□□□□ 0.07
CPSF1-207ENST00000531727 WASHC1A8K0Z3 465 aa15.51■□□□□ 0.07
CPSF1-207ENST00000531727 OR10H2O60403 315 aa15.51■□□□□ 0.07
CPSF1-207ENST00000531727 CLDN9O95484 217 aa15.51■□□□□ 0.07
CPSF1-207ENST00000531727 GALNSP34059 522 aa15.51■□□□□ 0.07
CPSF1-207ENST00000531727 MAN2A2P49641 1150 aa15.51■□□□□ 0.07
CPSF1-207ENST00000531727 SLC37A1P57057 533 aa15.51■□□□□ 0.07
CPSF1-207ENST00000531727 ZNF267Q14586 743 aaPredicted RBP15.51■□□□□ 0.07
CPSF1-207ENST00000531727 SLC10A1Q14973 349 aa15.51■□□□□ 0.07
CPSF1-207ENST00000531727 ZNF585AQ6P3V2 769 aa15.51■□□□□ 0.07
CPSF1-207ENST00000531727 NUDT13Q86X67 352 aa15.51■□□□□ 0.07
CPSF1-207ENST00000531727 DOK4Q8TEW6 326 aa15.51■□□□□ 0.07
CPSF1-207ENST00000531727 RIT1Q92963 219 aa15.51■□□□□ 0.07
CPSF1-207ENST00000531727 GAL3ST4Q96RP7 486 aa15.51■□□□□ 0.07
CPSF1-207ENST00000531727 WWTR1Q9GZV5 400 aa15.51■□□□□ 0.07
CPSF1-207ENST00000531727 VPS11Q9H270 941 aa15.51■□□□□ 0.07
CPSF1-207ENST00000531727 LDAHQ9H6V9 325 aa15.51■□□□□ 0.07
CPSF1-207ENST00000531727 NINJ2Q9NZG7 142 aa15.51■□□□□ 0.07
CPSF1-207ENST00000531727 CNIH4Q9P003 139 aa15.51■□□□□ 0.07
CPSF1-207ENST00000531727 BOKQ9UMX3 212 aaPredicted RBP15.51■□□□□ 0.07
CPSF1-207ENST00000531727 ZNF407Q9C0G0 2248 aa15.51■□□□□ 0.07
CPSF1-207ENST00000531727 OR6C76A6NM76 312 aa15.5■□□□□ 0.07
CPSF1-207ENST00000531727 FOXO6A8MYZ6 492 aa15.5■□□□□ 0.07
CPSF1-207ENST00000531727 OR7A17O14581 309 aa15.5■□□□□ 0.07
CPSF1-207ENST00000531727 HCN1O60741 890 aa15.5■□□□□ 0.07
CPSF1-207ENST00000531727 AIFM1O95831 613 aa15.5■□□□□ 0.07
CPSF1-207ENST00000531727 FBXO45P0C2W1 286 aa15.5■□□□□ 0.07
CPSF1-207ENST00000531727 MSX1P28360 303 aa15.5■□□□□ 0.07
CPSF1-207ENST00000531727 NEK2P51955 445 aa15.5■□□□□ 0.07
CPSF1-207ENST00000531727 EBPQ15125 230 aaKnown RBP15.5■□□□□ 0.07
CPSF1-207ENST00000531727 UBAP2Q5T6F2 1119 aaKnown RBP15.5■□□□□ 0.07
CPSF1-207ENST00000531727 OR52E8Q6IFG1 317 aa15.5■□□□□ 0.07
CPSF1-207ENST00000531727 B3GNT6Q6ZMB0 384 aa15.5■□□□□ 0.07
CPSF1-207ENST00000531727 RELL1Q8IUW5 271 aa15.5■□□□□ 0.07
CPSF1-207ENST00000531727 PLD6Q8N2A8 252 aaKnown RBP15.5■□□□□ 0.07
CPSF1-207ENST00000531727 FBXW8Q8N3Y1 598 aa15.5■□□□□ 0.07
CPSF1-207ENST00000531727 PTGR2Q8N8N7 351 aaPredicted RBP15.5■□□□□ 0.07
CPSF1-207ENST00000531727 FAM13CQ8NE31 585 aa15.5■□□□□ 0.07
CPSF1-207ENST00000531727 OR10G3Q8NGC4 313 aa15.5■□□□□ 0.07
CPSF1-207ENST00000531727 SARAFQ96BY9 339 aa15.5■□□□□ 0.07
CPSF1-207ENST00000531727 CDK15Q96Q40 435 aa15.5■□□□□ 0.07
CPSF1-207ENST00000531727 SERPINI1Q99574 410 aa15.5■□□□□ 0.07
CPSF1-207ENST00000531727 TTYH2Q9BSA4 534 aa15.5■□□□□ 0.07
CPSF1-207ENST00000531727 ZNF703Q9H7S9 590 aaPredicted RBP15.5■□□□□ 0.07
CPSF1-207ENST00000531727 NOL11Q9H8H0 719 aaKnown RBP15.5■□□□□ 0.07
CPSF1-207ENST00000531727 ZFP64Q9NPA5 681 aa15.5■□□□□ 0.07
CPSF1-207ENST00000531727 TNFRSF10DQ9UBN6 386 aa15.5■□□□□ 0.07
CPSF1-207ENST00000531727 ITGB1BP2Q9UKP3 347 aa15.5■□□□□ 0.07
CPSF1-207ENST00000531727 FAM215AQ9Y5M1 114 aa15.5■□□□□ 0.07
CPSF1-207ENST00000531727 CHCHD2Q9Y6H1 151 aaPredicted RBP15.5■□□□□ 0.07
CPSF1-207ENST00000531727 TRGV5A0A0B4J1U4 118 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 WDR1O75083 606 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 SEMA3DO95025 777 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 GBAP04062 536 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 CLPSP04118 112 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 RBP1P09455 135 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 RFPL3SP0C7P2 107 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 SLC35E2P0CK97 266 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 GLI4P10075 376 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 SERPINB3P29508 390 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 ARL1P40616 181 aaPredicted RBP15.49■□□□□ 0.07
CPSF1-207ENST00000531727 MAGEA12P43365 314 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 CCNG1P51959 295 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 KCNJ2P63252 427 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 WLSQ5T9L3 541 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 PRAMEF20Q5VT98 475 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 RTL6Q6ICC9 239 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 DMRTC2Q8IXT2 367 aaPredicted RBP15.49■□□□□ 0.07
CPSF1-207ENST00000531727 OR52B6Q8NGF0 335 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 OR10Q1Q8NGQ4 319 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 SLC44A1Q8WWI5 657 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 UCN3Q969E3 161 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 ATP6V1E2Q96A05 226 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 ISL2Q96A47 359 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 PHF21BQ96EK2 531 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 NTMT1Q9BV86 223 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 FUT8Q9BYC5 575 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 EXO5Q9H790 373 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 PROK2Q9HC23 129 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 ZNF358Q9NW07 568 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 SPRR3Q9UBC9 169 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 ACAD8Q9UKU7 415 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 TMCO1Q9UM00 188 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 NCKAP5O14513 1909 aa15.49■□□□□ 0.07
CPSF1-207ENST00000531727 LRRC3CA6NJW4 275 aa15.48■□□□□ 0.07
CPSF1-207ENST00000531727 PGRMC2O15173 223 aa15.48■□□□□ 0.07
CPSF1-207ENST00000531727 INHBAP08476 426 aa15.48■□□□□ 0.07
CPSF1-207ENST00000531727 ENDOUP21128 410 aaKnown RBP15.48■□□□□ 0.07
CPSF1-207ENST00000531727 NTRK2Q16620 822 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms