RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 AKAP13Q12802 2813 aa16.53■□□□□ 0.24
CTSB-222ENST00000531551 PRSS51A0A1B0GVH4 220 aa16.52■□□□□ 0.24
CTSB-222ENST00000531551 TCRBV16S1A1N1A0A5B0 115 aa16.52■□□□□ 0.24
CTSB-222ENST00000531551 MED19A0JLT2 244 aaPredicted RBP16.52■□□□□ 0.24
CTSB-222ENST00000531551 SLC35E2P0CK97 266 aa16.52■□□□□ 0.24
CTSB-222ENST00000531551 STT3AP46977 705 aa16.52■□□□□ 0.24
CTSB-222ENST00000531551 EEF1A2Q05639 463 aaKnown RBP16.52■□□□□ 0.24
CTSB-222ENST00000531551 SRSF6Q13247 344 aaKnown RBP16.52■□□□□ 0.24
CTSB-222ENST00000531551 LTB4RQ15722 352 aa16.52■□□□□ 0.24
CTSB-222ENST00000531551 C6orf10Q5SRN2 563 aa16.52■□□□□ 0.24
CTSB-222ENST00000531551 ANKRD37Q7Z713 158 aa16.52■□□□□ 0.24
CTSB-222ENST00000531551 ZNF248Q8NDW4 579 aa16.52■□□□□ 0.24
CTSB-222ENST00000531551 ZFP28Q8NHY6 868 aa16.52■□□□□ 0.24
CTSB-222ENST00000531551 SUN3Q8TAQ9 357 aa16.52■□□□□ 0.24
CTSB-222ENST00000531551 AMDHD1Q96NU7 426 aa16.52■□□□□ 0.24
CTSB-222ENST00000531551 SLC25A23Q9BV35 468 aa16.52■□□□□ 0.24
CTSB-222ENST00000531551 RMND5AQ9H871 391 aa16.52■□□□□ 0.24
CTSB-222ENST00000531551 FAM120CQ9NX05 1096 aaKnown RBP16.52■□□□□ 0.24
CTSB-222ENST00000531551 C19orf25Q9UFG5 118 aaPredicted RBP16.52■□□□□ 0.24
CTSB-222ENST00000531551 PCDHGB4Q9UN71 923 aa16.52■□□□□ 0.24
CTSB-222ENST00000531551 SCN2AQ99250 2005 aa16.52■□□□□ 0.23
CTSB-222ENST00000531551 A0A1W2PP18 115 aa16.52■□□□□ 0.23
CTSB-222ENST00000531551 CAPN14A8MX76 684 aa16.52■□□□□ 0.23
CTSB-222ENST00000531551 KLK10O43240 276 aa16.52■□□□□ 0.23
CTSB-222ENST00000531551 COX4I1P13073 169 aa16.52■□□□□ 0.23
CTSB-222ENST00000531551 PGDP52209 483 aa16.52■□□□□ 0.23
CTSB-222ENST00000531551 IGLV3-21P80748 117 aaPredicted RBP16.52■□□□□ 0.23
CTSB-222ENST00000531551 SFT2D3Q587I9 215 aa16.52■□□□□ 0.23
CTSB-222ENST00000531551 DGAT2L6Q6ZPD8 337 aa16.52■□□□□ 0.23
CTSB-222ENST00000531551 OR4A15Q8NGL6 344 aa16.52■□□□□ 0.23
CTSB-222ENST00000531551 RP9Q8TA86 221 aaKnown RBP16.52■□□□□ 0.23
CTSB-222ENST00000531551 RIT1Q92963 219 aa16.52■□□□□ 0.23
CTSB-222ENST00000531551 CMTM5Q96DZ9 223 aa16.52■□□□□ 0.23
CTSB-222ENST00000531551 MAGED4Q96JG8 741 aa16.52■□□□□ 0.23
CTSB-222ENST00000531551 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.52■□□□□ 0.23
CTSB-222ENST00000531551 PCDHGA6Q9Y5G7 932 aa16.52■□□□□ 0.23
CTSB-222ENST00000531551 SNX8Q9Y5X2 465 aa16.52■□□□□ 0.23
CTSB-222ENST00000531551 C17orf105B2RV13 164 aa16.51■□□□□ 0.23
CTSB-222ENST00000531551 RNASET2O00584 256 aaKnown RBP16.51■□□□□ 0.23
CTSB-222ENST00000531551 CREG1O75629 220 aa16.51■□□□□ 0.23
CTSB-222ENST00000531551 IGHEP01854 428 aa16.51■□□□□ 0.23
CTSB-222ENST00000531551 BIKQ13323 160 aa16.51■□□□□ 0.23
CTSB-222ENST00000531551 SSPNQ14714 243 aa16.51■□□□□ 0.23
CTSB-222ENST00000531551 CEBPEQ15744 281 aa16.51■□□□□ 0.23
CTSB-222ENST00000531551 C6orf163Q5TEZ5 329 aa16.51■□□□□ 0.23
CTSB-222ENST00000531551 DNAJC14Q6Y2X3 702 aaPredicted RBP16.51■□□□□ 0.23
CTSB-222ENST00000531551 OR5P2Q8WZ92 322 aa16.51■□□□□ 0.23
CTSB-222ENST00000531551 KAT2AQ92830 837 aa16.51■□□□□ 0.23
CTSB-222ENST00000531551 PANX1Q96RD7 426 aa16.51■□□□□ 0.23
CTSB-222ENST00000531551 NPAS2Q99743 824 aa16.51■□□□□ 0.23
CTSB-222ENST00000531551 EFHD1Q9BUP0 239 aa16.51■□□□□ 0.23
CTSB-222ENST00000531551 SLC52A3Q9NQ40 469 aa16.51■□□□□ 0.23
CTSB-222ENST00000531551 ACSS1Q9NUB1 689 aaPredicted RBP16.51■□□□□ 0.23
CTSB-222ENST00000531551 CLCA3PQ9Y6N3 262 aa16.51■□□□□ 0.23
CTSB-222ENST00000531551 DYTNA2CJ06 578 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 ASPDHA6ND91 283 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 SCN2BO60939 215 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 ANP32DO95626 131 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 ATP1B1P05026 303 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 GSNP06396 782 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 MMP11P24347 488 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 FRKP42685 505 aaPredicted RBP16.5■□□□□ 0.23
CTSB-222ENST00000531551 CPA2P48052 419 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 MRPS35P82673 323 aaKnown RBP16.5■□□□□ 0.23
CTSB-222ENST00000531551 STX5Q13190 355 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 IL10RAQ13651 578 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 PAGE3Q5JUK9 113 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 TMEM205Q6UW68 189 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 TMEM107Q6UX40 140 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 SZRD1Q7Z422 152 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 CPEB2Q7Z5Q1 589 aaKnown RBP16.5■□□□□ 0.23
CTSB-222ENST00000531551 GALNT12Q8IXK2 581 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 C7orf57Q8NEG2 295 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 ITCHQ96J02 903 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 PELOQ9BRX2 385 aaKnown RBP16.5■□□□□ 0.23
CTSB-222ENST00000531551 INPP5KQ9BT40 448 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 CNPPD1Q9BV87 410 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 ADAP2Q9NPF8 381 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 ARL8BQ9NVJ2 186 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 LEF1Q9UJU2 399 aaPredicted RBP16.5■□□□□ 0.23
CTSB-222ENST00000531551 HS3ST3B1Q9Y662 390 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 AHCTF1Q8WYP5 2266 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 RFXANKO14593 260 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 DYRK3O43781 588 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 SEC24DO94855 1032 aaPredicted RBP16.5■□□□□ 0.23
CTSB-222ENST00000531551 CYC1P08574 325 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 SOAT1P35610 550 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 CDK9P50750 372 aaKnown RBP16.5■□□□□ 0.23
CTSB-222ENST00000531551 HBA1P69905 142 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 ZNF267Q14586 743 aaPredicted RBP16.5■□□□□ 0.23
CTSB-222ENST00000531551 TLR1Q15399 786 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 ELAVL1Q15717 326 aaKnown RBP16.5■□□□□ 0.23
CTSB-222ENST00000531551 REP15Q6BDI9 236 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 FAM111BQ6SJ93 734 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 TSPEARQ8WU66 669 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 GATA6Q92908 595 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 FAM117AQ9C073 453 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 IL1RL2Q9HB29 575 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 BTNL2Q9UIR0 455 aa16.5■□□□□ 0.23
CTSB-222ENST00000531551 CCT8L1PA6NM43 557 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms