RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 FAM45AQ8TCE6 357 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 ANKRD7Q92527 254 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 SIGLEC10Q96LC7 697 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 KCNC2Q96PR1 638 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 GAL3ST4Q96RP7 486 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 TBCDQ9BTW9 1192 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 CALHM2Q9HA72 323 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 JKAMPQ9P055 326 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 CORO1CQ9ULV4 474 aaPredicted RBP8.24□□□□□ -1.09
VPS11-203ENST00000529545 CHCHD2Q9Y6H1 151 aaPredicted RBP8.24□□□□□ -1.09
VPS11-203ENST00000529545 NINQ8N4C6 2090 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 FREM3P0C091 2139 aa8.24□□□□□ -1.09
VPS11-203ENST00000529545 ANKRD33BA6NCL7 494 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 KDM4EB2RXH2 506 aaPredicted RBP8.23□□□□□ -1.09
VPS11-203ENST00000529545 CLGNO14967 610 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 TRIM3O75382 744 aaPredicted RBP8.23□□□□□ -1.09
VPS11-203ENST00000529545 SNX4O95219 450 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 LRATO95237 230 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 ACSL3O95573 720 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 HPNP05981 417 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 CYP4B1P13584 511 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 CPN2P22792 545 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 GABRB3P28472 473 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 MAGEA3P43357 314 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 STT3AP46977 705 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 CDK9P50750 372 aaKnown RBP8.23□□□□□ -1.09
VPS11-203ENST00000529545 DIO3P55073 304 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 EEF1A1P68104 462 aaKnown RBP8.23□□□□□ -1.09
VPS11-203ENST00000529545 RPP38P78345 283 aaKnown RBP8.23□□□□□ -1.09
VPS11-203ENST00000529545 CDKL1Q00532 357 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 HIST2H2ACQ16777 129 aaPredicted RBP8.23□□□□□ -1.09
VPS11-203ENST00000529545 PPP1R3AQ16821 1122 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 KCTD19Q17RG1 926 aaPredicted RBP8.23□□□□□ -1.09
VPS11-203ENST00000529545 AP5B1Q2VPB7 878 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 SPANXN3Q5MJ09 141 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 EEF1A1P5Q5VTE0 462 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 HIST2H2AA3Q6FI13 130 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 SCIMPQ6UWF3 145 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 RNF111Q6ZNA4 994 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 GALNT7Q86SF2 657 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 LUZP2Q86TE4 346 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 C9orf40Q8IXQ3 194 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 NKAPQ8N5F7 415 aaKnown RBP8.23□□□□□ -1.09
VPS11-203ENST00000529545 ABTB1Q969K4 478 aaPredicted RBP8.23□□□□□ -1.09
VPS11-203ENST00000529545 NTNG2Q96CW9 530 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 FBXL20Q96IG2 436 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 ZFP3Q96NJ6 502 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 F2RL3Q96RI0 385 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 KRT12Q99456 494 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 CCL19Q99731 98 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 TM9SF2Q99805 663 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 MAPKAP1Q9BPZ7 522 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 WDR83Q9BRX9 315 aaKnown RBP8.23□□□□□ -1.09
VPS11-203ENST00000529545 NAT9Q9BTE0 207 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 SFXN3Q9BWM7 321 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 ACBD3Q9H3P7 528 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 PROK2Q9HC23 129 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 PRDM7Q9NQW5 492 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 GALNT8Q9NY28 637 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 GPRC5BQ9NZH0 403 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 TRPS1Q9UHF7 1281 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 CNOT11Q9UKZ1 510 aaKnown RBP8.23□□□□□ -1.09
VPS11-203ENST00000529545 SLC6A5Q9Y345 797 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 COL6A5A8TX70 2615 aa8.23□□□□□ -1.09
VPS11-203ENST00000529545 A0A1W2PPR1 153 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 NPEPPSL1A6NEC2 478 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 TRIM64A6NGJ6 449 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 TRIM64BA6NI03 449 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 CDC7O00311 574 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 OR10H2O60403 315 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 ACTL6AO96019 429 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 IGKV3-11P04433 115 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 TLX1P31314 330 aaPredicted RBP8.22□□□□□ -1.09
VPS11-203ENST00000529545 GDF5P43026 501 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 TMED10P49755 219 aaKnown RBP8.22□□□□□ -1.09
VPS11-203ENST00000529545 LAPTM5Q13571 262 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 RPS6KA2Q15349 733 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 ACKR1Q16570 336 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 NTRK2Q16620 822 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 NHSL2Q5HYW2 709 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 PAGE2BQ5JRK9 111 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 HLA-DQA1Q5Y7H0 255 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 ADAMTSL2Q86TH1 951 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 CNTN4Q8IWV2 1026 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 OR4N5Q8IXE1 308 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 PPIL6Q8IXY8 311 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 ACOT4Q8N9L9 421 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 SNX31Q8N9S9 440 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 ZPLD1Q8TCW7 415 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 TANKQ92844 425 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 UCN3Q969E3 161 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 MAGOHBQ96A72 148 aaKnown RBP8.22□□□□□ -1.09
VPS11-203ENST00000529545 ANKRD9Q96BM1 317 aaPredicted RBP8.22□□□□□ -1.09
VPS11-203ENST00000529545 PPWD1Q96BP3 646 aaKnown RBP8.22□□□□□ -1.09
VPS11-203ENST00000529545 PTCD3Q96EY7 689 aaKnown RBP8.22□□□□□ -1.09
VPS11-203ENST00000529545 PERPQ96FX8 193 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 CERS2Q96G23 380 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 WDYHV1Q96HA8 205 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 DOCK7Q96N67 2140 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 PELOQ9BRX2 385 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms