RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 GIMAP4Q9NUV9 329 aa23.17■■□□□ 1.3
LDLRAD3-203ENST00000528989 TAS2R9Q9NYW1 312 aa23.17■■□□□ 1.3
LDLRAD3-203ENST00000528989 SNX8Q9Y5X2 465 aa23.17■■□□□ 1.3
LDLRAD3-203ENST00000528989 GAB1Q13480 694 aa23.17■■□□□ 1.3
LDLRAD3-203ENST00000528989 TRMT5Q32P41 509 aaKnown RBP23.17■■□□□ 1.3
LDLRAD3-203ENST00000528989 ZNF771Q7L3S4 317 aaPredicted RBP23.17■■□□□ 1.3
LDLRAD3-203ENST00000528989 KIF2BQ8N4N8 673 aa23.17■■□□□ 1.3
LDLRAD3-203ENST00000528989 OR5AK3PQ8NH89 298 aa23.17■■□□□ 1.3
LDLRAD3-203ENST00000528989 OR5P2Q8WZ92 322 aa23.17■■□□□ 1.3
LDLRAD3-203ENST00000528989 KAT2AQ92830 837 aa23.17■■□□□ 1.3
LDLRAD3-203ENST00000528989 SPSB2Q99619 263 aa23.17■■□□□ 1.3
LDLRAD3-203ENST00000528989 PCDHGB4Q9UN71 923 aa23.17■■□□□ 1.3
LDLRAD3-203ENST00000528989 CCDC88CQ9P219 2028 aa23.17■■□□□ 1.3
LDLRAD3-203ENST00000528989 ANKRD65E5RJM6 399 aa23.16■■□□□ 1.3
LDLRAD3-203ENST00000528989 ATP5HO75947 161 aa23.16■■□□□ 1.3
LDLRAD3-203ENST00000528989 ANP32DO95626 131 aa23.16■■□□□ 1.3
LDLRAD3-203ENST00000528989 HOXB9P17482 250 aaPredicted RBP23.16■■□□□ 1.3
LDLRAD3-203ENST00000528989 DDX5P17844 614 aaKnown RBP23.16■■□□□ 1.3
LDLRAD3-203ENST00000528989 SPINK2P20155 84 aa23.16■■□□□ 1.3
LDLRAD3-203ENST00000528989 SOX18P35713 384 aa23.16■■□□□ 1.3
LDLRAD3-203ENST00000528989 MRPS35P82673 323 aaKnown RBP23.16■■□□□ 1.3
LDLRAD3-203ENST00000528989 QSOX2Q6ZRP7 698 aa23.16■■□□□ 1.3
LDLRAD3-203ENST00000528989 NATD1Q8N6N6 113 aa23.16■■□□□ 1.3
LDLRAD3-203ENST00000528989 SIMC1Q8NDZ2 872 aa23.16■■□□□ 1.3
LDLRAD3-203ENST00000528989 SLC26A1Q9H2B4 701 aa23.16■■□□□ 1.3
LDLRAD3-203ENST00000528989 SIRT3Q9NTG7 399 aaPredicted RBP23.16■■□□□ 1.3
LDLRAD3-203ENST00000528989 PCDHGA7Q9Y5G6 932 aa23.16■■□□□ 1.3
LDLRAD3-203ENST00000528989 SPTBN4Q9H254 2564 aa23.16■■□□□ 1.3
LDLRAD3-203ENST00000528989 A0A096LPI6 279 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 BLACEA4D250 179 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 IDSB3KWA1 339 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 ALBP02768 609 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 CCNYL3P0C7X3 344 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 FOXC1Q12948 553 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 NSDHLQ15738 373 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 LRIF1Q5T3J3 769 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 C8orf82Q6P1X6 216 aaPredicted RBP23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 DEFB107AQ8IZN7 70 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 GOT1L1Q8NHS2 421 aaPredicted RBP23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 ROPN1LQ96C74 230 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 MAGED4Q96JG8 741 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 CGREF1Q99674 301 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 BTBD10Q9BSF8 475 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 PACSIN3Q9UKS6 424 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 ACSL6Q9UKU0 697 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 IGKV3D-11A0A0A0MRZ8 115 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 CDRT15L2A8MXV6 281 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 GYG2O15488 501 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 KLF7O75840 302 aaPredicted RBP23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 PTPN4P29074 926 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 RBMS1P29558 406 aaKnown RBP23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 GPC1P35052 558 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 TRPC1P48995 793 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 IGLV3-21P80748 117 aaPredicted RBP23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 MLC1Q15049 377 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 TMEM107Q6UX40 140 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 AMER2Q8N7J2 671 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 FKBP10Q96AY3 582 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 FAM122AQ96E09 287 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 GPATCH1Q9BRR8 931 aaKnown RBP23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 C1orf21Q9H246 121 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 IKZF5Q9H5V7 419 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 ASCL3Q9NQ33 180 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 GID8Q9NWU2 228 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 GPN3Q9UHW5 284 aaPredicted RBP23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 CROTQ9UKG9 612 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 KLK13Q9UKR3 277 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 MMACHCQ9Y4U1 282 aa23.15■■□□□ 1.3
LDLRAD3-203ENST00000528989 TRBV5-3A0A0A0MS03 114 aa23.14■■□□□ 1.29
LDLRAD3-203ENST00000528989 ERN1O75460 977 aaKnown RBP23.14■■□□□ 1.29
LDLRAD3-203ENST00000528989 SLC35E2P0CK97 266 aa23.14■■□□□ 1.29
LDLRAD3-203ENST00000528989 TCN2P20062 427 aa23.14■■□□□ 1.29
LDLRAD3-203ENST00000528989 CASP9P55211 416 aa23.14■■□□□ 1.29
LDLRAD3-203ENST00000528989 SELPLGQ14242 412 aa23.14■■□□□ 1.29
LDLRAD3-203ENST00000528989 NCF4Q15080 339 aa23.14■■□□□ 1.29
LDLRAD3-203ENST00000528989 RABL3Q5HYI8 236 aa23.14■■□□□ 1.29
LDLRAD3-203ENST00000528989 NANOGP8Q6NSW7 305 aa23.14■■□□□ 1.29
LDLRAD3-203ENST00000528989 FAM111BQ6SJ93 734 aa23.14■■□□□ 1.29
LDLRAD3-203ENST00000528989 LANCL3Q6ZV70 420 aa23.14■■□□□ 1.29
LDLRAD3-203ENST00000528989 SAMD14Q8IZD0 417 aaPredicted RBP23.14■■□□□ 1.29
LDLRAD3-203ENST00000528989 RBM18Q96H35 190 aaKnown RBP23.14■■□□□ 1.29
LDLRAD3-203ENST00000528989 NANOGQ9H9S0 305 aa23.14■■□□□ 1.29
LDLRAD3-203ENST00000528989 C9J4A7 227 aa23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 OR10H2O60403 315 aa23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 NME6O75414 186 aaPredicted RBP23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 IFNA16P05015 189 aa23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 ATP1B1P05026 303 aa23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 CT62P0C5K7 136 aa23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 SLC6A2P23975 617 aa23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 PSME3P61289 254 aa23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 TRMT12Q53H54 448 aaKnown RBP23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 HACD2Q6Y1H2 254 aa23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 PNPT1Q8TCS8 783 aaKnown RBP23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 C14orf105Q9NVL8 296 aa23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 C3orf18Q9UK00 162 aa23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 AKAP13Q12802 2813 aa23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 A8MUA0 341 aa23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 HEXBP07686 556 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms