RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 GPR137Q96N19 417 aa11.9□□□□□ -0.5
TRAPPC4-205ENST00000525079 GAL3ST4Q96RP7 486 aa11.9□□□□□ -0.5
TRAPPC4-205ENST00000525079 PELOQ9BRX2 385 aaKnown RBP11.9□□□□□ -0.5
TRAPPC4-205ENST00000525079 ACPTQ9BZG2 426 aa11.9□□□□□ -0.5
TRAPPC4-205ENST00000525079 SHCBP1LQ9BZQ2 653 aa11.9□□□□□ -0.5
TRAPPC4-205ENST00000525079 TIMMDC1Q9NPL8 285 aa11.9□□□□□ -0.5
TRAPPC4-205ENST00000525079 DEPPQ9NTK1 212 aa11.9□□□□□ -0.5
TRAPPC4-205ENST00000525079 NMRK1Q9NWW6 199 aa11.9□□□□□ -0.5
TRAPPC4-205ENST00000525079 PLEKHB1Q9UF11 243 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC4-205ENST00000525079 PCDHA9Q9Y5H5 950 aa11.9□□□□□ -0.5
TRAPPC4-205ENST00000525079 SVILO95425 2214 aa11.9□□□□□ -0.51
TRAPPC4-205ENST00000525079 COL12A1Q99715 3063 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 A0A0G2JMM0 328 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 A0A1W2PPB8 328 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 A0A1W2PRS3 328 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 PINLYPA6NC86 204 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 KIR3DP1A8MWS1 328 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 ASNA1O43681 348 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 ERAL1O75616 437 aaKnown RBP11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 ESRRBO95718 433 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 CLDN1O95832 211 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 CLPSP04118 112 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 ENO1P06733 434 aaKnown RBP11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 CT62P0C5K7 136 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 ZNF24P17028 368 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 NT5EP21589 574 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 SSTR4P31391 388 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 FEN1P39748 380 aaKnown RBP11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 ALDH9A1P49189 494 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 SLC18A2Q05940 514 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 IFFO1Q0D2I5 559 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 CSTF3Q12996 717 aaKnown RBP11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 SPRED3Q2MJR0 410 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 ERCC6LQ2NKX8 1250 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 PIGGQ5H8A4 983 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 CFAP157Q5JU67 520 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 RNF111Q6ZNA4 994 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 CNPY4Q8N129 248 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 PSD4Q8NDX1 1056 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 AENQ8WTP8 325 aaKnown RBP11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 APIPQ96GX9 242 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 CES1P1Q9UKY3 287 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 STK38LQ9Y2H1 464 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 LRRK2Q5S007 2527 aa11.89□□□□□ -0.51
TRAPPC4-205ENST00000525079 HIVEP3Q5T1R4 2406 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 CROCCQ5TZA2 2017 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 A0A1B0GUH1 482 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 C1orf226A1L170 272 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 CCL21O00585 134 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 HS6ST1O60243 411 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 SLC19A2O60779 497 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 ZG16O60844 167 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 GUCY1B2O75343 617 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 SPAG7O75391 227 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 NADKO95544 446 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 NUDT17P0C025 328 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 HSD3B1P14060 373 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 CPMP14384 443 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 PORP16435 677 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 HSD3B2P26439 372 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 COL8A1P27658 744 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 DEKP35659 375 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 NR0B1P51843 470 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 SLC37A1P57057 533 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 RAE1P78406 368 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 DUSP2Q05923 314 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 RBPJQ06330 500 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 C3AR1Q16581 482 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 KRTCAP3Q53RY4 240 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 SPDYAQ5MJ70 313 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 SLC48A1Q6P1K1 146 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 FAM111BQ6SJ93 734 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 OPN5Q6U736 354 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 RTL4Q6ZR62 310 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 FRMD7Q6ZUT3 714 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 SLC29A4Q7RTT9 530 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 C10orf107Q8IVU9 208 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 GALNT12Q8IXK2 581 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 GPALPP1Q8IXQ4 340 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 NUBPLQ8TB37 319 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 RDH11Q8TC12 318 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 ZBTB9Q96C00 473 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 EBPLQ9BY08 206 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 WWTR1Q9GZV5 400 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 CXorf21Q9HAI6 301 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 TNFRSF12AQ9NP84 129 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 OXSMQ9NWU1 459 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 HEY2Q9UBP5 337 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 PTPN13Q12923 2485 aa11.88□□□□□ -0.51
TRAPPC4-205ENST00000525079 EML6Q6ZMW3 1958 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 GNG14A0A1W2PPG7 69 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 CCDC151A5D8V7 595 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 FAM166BA8MTA8 275 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 ESPNB1AK53 854 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 TFECO14948 347 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 PCDH7O60245 1069 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 CDC40O60508 579 aaKnown RBP eCLIP11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 CRCPO75575 148 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 PDE9AO76083 593 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 IL3P08700 152 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms