RNA–Protein interactions for RNA: ENST00000525076.5

CTSB-208, Transcript of cathepsin B, human

TSL 5

Gene CTSB, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-208	ENST00000525076	C18orf63	Q68DL7	685 aa		13.97	□□□□□ -0.17
CTSB-208	ENST00000525076	GRHL2	Q6ISB3	625 aa		13.97	□□□□□ -0.17
CTSB-208	ENST00000525076	LYPD8	Q6UX82	237 aa		13.97	□□□□□ -0.17
CTSB-208	ENST00000525076	DGAT2L6	Q6ZPD8	337 aa		13.97	□□□□□ -0.17
CTSB-208	ENST00000525076	RAPH1	Q70E73	1250 aa		13.97	□□□□□ -0.17
CTSB-208	ENST00000525076	MYLK4	Q86YV6	388 aa	Predicted RBP	13.97	□□□□□ -0.17
CTSB-208	ENST00000525076	TAGAP	Q8N103	731 aa		13.97	□□□□□ -0.17
CTSB-208	ENST00000525076	ZCCHC7	Q8N3Z6	543 aa	Known RBP	13.97	□□□□□ -0.17
CTSB-208	ENST00000525076	OR10G3	Q8NGC4	313 aa		13.97	□□□□□ -0.17
CTSB-208	ENST00000525076	ERVK-6	Q9BXR3	956 aa		13.97	□□□□□ -0.17
CTSB-208	ENST00000525076	WWTR1	Q9GZV5	400 aa		13.97	□□□□□ -0.17
CTSB-208	ENST00000525076	SAYSD1	Q9NPB0	183 aa		13.97	□□□□□ -0.17
CTSB-208	ENST00000525076	MTRF1L	Q9UGC7	380 aa	Known RBP	13.97	□□□□□ -0.17
CTSB-208	ENST00000525076	ERVK-19	Q9WJR5	959 aa		13.97	□□□□□ -0.17
CTSB-208	ENST00000525076	SAR1B	Q9Y6B6	198 aa		13.97	□□□□□ -0.17
CTSB-208	ENST00000525076	MPDZ	O75970	2070 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	LRRC3C	A6NJW4	275 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	OR6C76	A6NM76	312 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076		A6NNC1	897 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	CAPN14	A8MX76	684 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	TP53I11	O14683	189 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	EPB42	P16452	691 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	GDF1	P27539	372 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	PIK3CB	P42338	1070 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	ASCL1	P50553	236 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	ARFIP1	P53367	373 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	PHEX	P78562	749 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	PCDH1	Q08174	1060 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	CALCOCO2	Q13137	446 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	EBP	Q15125	230 aa	Known RBP	13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	SF3B4	Q15427	424 aa	Known RBP eCLIP	13.96	□□□□□ -0.17	1e-7	■■■□□ 16.8
CTSB-208	ENST00000525076	NTRK2	Q16620	822 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	SPRED3	Q2MJR0	410 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	FLYWCH1	Q4VC44	716 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	CYS1	Q717R9	158 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	MAATS1	Q7Z4T9	603 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	TBC1D1	Q86TI0	1168 aa	Predicted RBP	13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	CTAGE3P	Q8IX95	158 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	HUS1B	Q8NHY5	278 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	FAM222B	Q8WU58	562 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	UBTD2	Q8WUN7	234 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	DIO2	Q92813	273 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	RIT1	Q92963	219 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	ZNF597	Q96LX8	424 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	MTERF1	Q99551	399 aa	Known RBP	13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	LIME1	Q9H400	295 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	NMRAL1	Q9HBL8	299 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	PROK2	Q9HC23	129 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	FOXD3	Q9UJU5	478 aa	Predicted RBP	13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	ANGPTL3	Q9Y5C1	460 aa		13.96	□□□□□ -0.17
CTSB-208	ENST00000525076	ZNF469	Q96JG9	3925 aa	Predicted RBP	13.96	□□□□□ -0.18
CTSB-208	ENST00000525076	TCRBV9S1A1T	A0A576	114 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	FAM159B	A6NKW6	160 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	PLPP1	O14494	284 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	EIF3H	O15372	352 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	PROM1	O43490	865 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	KERA	O60938	352 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	PRKRA	O75569	313 aa	Known RBP	13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	TRAPPC6A	O75865	159 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	LRAT	O95237	230 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	GPR75	O95800	540 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	EPPIN	O95925	133 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	IL2RA	P01589	272 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	C1QA	P02745	245 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	DGKQ	P52824	942 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	HNRNPH2	P55795	449 aa	Known RBP	13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	SLC37A1	P57057	533 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	DUSP8	Q13202	625 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	SLMAP	Q14BN4	828 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	ACSF3	Q4G176	576 aa	Predicted RBP	13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	GRTP1	Q5TC63	336 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	FBXW10	Q5XX13	1052 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	C3orf62	Q6ZUJ4	267 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	SEM1	Q6ZVN7	128 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	ISCA2	Q86U28	154 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	CDC20B	Q86Y33	519 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	LACC1	Q8IV20	430 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	PM20D2	Q8IYS1	436 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	RNF175	Q8N4F7	328 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	RELL2	Q8NC24	303 aa	Predicted RBP	13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	DOK4	Q8TEW6	326 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	RNASE6	Q93091	150 aa	Known RBP	13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	REPS1	Q96D71	796 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	HSPBAP1	Q96EW2	488 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	ALPK1	Q96QP1	1244 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	SH3GL2	Q99962	352 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	WDR41	Q9HAD4	459 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	DMRT3	Q9NQL9	472 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	LYAR	Q9NX58	379 aa	Known RBP	13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	ZNF629	Q9UEG4	869 aa	Predicted RBP	13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	CNOT11	Q9UKZ1	510 aa	Known RBP	13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	PLEKHA6	Q9Y2H5	1048 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	PCDHGA11	Q9Y5H2	935 aa		13.95	□□□□□ -0.18
CTSB-208	ENST00000525076	HRNR	Q86YZ3	2850 aa	Predicted RBP	13.94	□□□□□ -0.18
CTSB-208	ENST00000525076	C2orf92	A0A1B0GVN3	265 aa		13.94	□□□□□ -0.18
CTSB-208	ENST00000525076	ANKRD33B	A6NCL7	494 aa		13.94	□□□□□ -0.18
CTSB-208	ENST00000525076	SYCE1L	A8MT33	242 aa		13.94	□□□□□ -0.18
CTSB-208	ENST00000525076	UBXN8	O00124	270 aa		13.94	□□□□□ -0.18
CTSB-208	ENST00000525076	TRIM3	O75382	744 aa	Predicted RBP	13.94	□□□□□ -0.18
CTSB-208	ENST00000525076	GSTA2	P09210	222 aa		13.94	□□□□□ -0.18

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