RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 ERVK-6Q9BXR3 956 aa9.47□□□□□ -0.89
CTNNA1-235ENST00000522730 CDC42EP4Q9H3Q1 356 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-235ENST00000522730 WDR41Q9HAD4 459 aa9.47□□□□□ -0.89
CTNNA1-235ENST00000522730 SEMA4BQ9NPR2 832 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-235ENST00000522730 PNPLA3Q9NST1 481 aa9.47□□□□□ -0.89
CTNNA1-235ENST00000522730 SACM1LQ9NTJ5 587 aa9.47□□□□□ -0.89
CTNNA1-235ENST00000522730 ARGLU1Q9NWB6 273 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-235ENST00000522730 MS4A12Q9NXJ0 267 aa9.47□□□□□ -0.89
CTNNA1-235ENST00000522730 TUBA8Q9NY65 449 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-235ENST00000522730 ACAD8Q9UKU7 415 aa9.47□□□□□ -0.89
CTNNA1-235ENST00000522730 ERVK-19Q9WJR5 959 aa9.47□□□□□ -0.89
CTNNA1-235ENST00000522730 TNPO3Q9Y5L0 923 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-235ENST00000522730 CCDC168Q8NDH2 2452 aa9.46□□□□□ -0.89
CTNNA1-235ENST00000522730 NKX2-6A6NCS4 301 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 H0YIV9 168 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 PGRMC2O15173 223 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 TMPRSS11DO60235 418 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 SMIM24O75264 130 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 CLDN9O95484 217 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 GPR75O95800 540 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 ALDOAP04075 364 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 KLK1P06870 262 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 NR2F6P10588 404 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 TSPAN8P19075 237 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 ELAVL4P26378 380 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 PTGER4P35408 488 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 CCNG1P51959 295 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 KCNJ2P63252 427 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 PLIN5Q00G26 463 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 TNFRSF17Q02223 184 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 SLC10A1Q14973 349 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 PCBP2Q15366 365 aaKnown RBP eCLIP9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 BEND6Q5SZJ8 279 aaPredicted RBP9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 NDUFAF5Q5TEU4 345 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 PRAMEF20Q5VT98 475 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 TMEM64Q6YI46 380 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 RNF111Q6ZNA4 994 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 RGS9BPQ6ZS82 235 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 RPS27LQ71UM5 84 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 TRMT10CQ7L0Y3 403 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 SLC29A4Q7RTT9 530 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 CCDC91Q7Z6B0 441 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 C9orf40Q8IXQ3 194 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 ZNF295-AS1Q8N0V1 137 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 MARVELD2Q8N4S9 558 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 TMEM251Q8N6I4 163 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 SLC22A8Q8TCC7 542 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 PHF10Q8WUB8 498 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 CHTF18Q8WVB6 975 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 RND1Q92730 232 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 LURAP1Q96LR2 239 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 GPR78Q96P69 363 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 SMC6Q96SB8 1091 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 REPIN1Q9BWE0 567 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 TP63Q9H3D4 680 aaPredicted RBP9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 ACSS3Q9H6R3 686 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 IL1RL2Q9HB29 575 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 RNF6Q9Y252 685 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 ASB4Q9Y574 426 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 LIPGQ9Y5X9 500 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 ZNF407Q9C0G0 2248 aa9.46□□□□□ -0.9
CTNNA1-235ENST00000522730 OR7A17O14581 309 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 SCELO95171 688 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 RBP1P09455 135 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 PIK3R1P27986 724 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 BSGP35613 385 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 MAN2A2P49641 1150 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 NUP107P57740 925 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 KRTAP10-9P60411 292 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 IGLV3-21P80748 117 aaPredicted RBP9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 PCDH1Q08174 1060 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 IFT88Q13099 833 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 BIKQ13323 160 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 CUL3Q13618 768 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 E2F2Q14209 437 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 MPEG1Q2M385 716 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 TECRLQ5HYJ1 363 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 EMC4Q5J8M3 183 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 CCNYL2Q5T2Q4 361 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 HLA-DQA1Q5Y7H0 255 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 TAOK1Q7L7X3 1001 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 MILR1Q7Z6M3 343 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 ST13P4Q8IZP2 240 aaPredicted RBP9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 ZCCHC7Q8N3Z6 543 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 MREGQ8N565 214 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 GOLM1Q8NBJ4 401 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 C7orf57Q8NEG2 295 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 OR52B6Q8NGF0 335 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 OR8K3Q8NH51 312 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 ASB5Q8WWX0 329 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 FBXL20Q96IG2 436 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 ART5Q96L15 291 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 NSUN5Q96P11 429 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 SERPINI1Q99574 410 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 TMUB1Q9BVT8 246 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 TRIM8Q9BZR9 551 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 DDX31Q9H8H2 851 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 KCNJ16Q9NPI9 418 aa9.45□□□□□ -0.9
CTNNA1-235ENST00000522730 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms