RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 CYB5D2Q8WUJ1 264 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 SKA2Q8WVK7 121 aaPredicted RBP4.8□□□□□ -1.64
SDC2-204ENST00000519914 APOBEC4Q8WW27 367 aaKnown RBP4.8□□□□□ -1.64
SDC2-204ENST00000519914 GEMIN6Q8WXD5 167 aaKnown RBP4.8□□□□□ -1.64
SDC2-204ENST00000519914 SLC38A4Q969I6 547 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 NEIL2Q969S2 332 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 RAB7BQ96AH8 199 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 TRIM43Q96BQ3 446 aaPredicted RBP4.8□□□□□ -1.64
SDC2-204ENST00000519914 TAMM41Q96BW9 452 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 PDXPQ96GD0 296 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 MTERF1Q99551 399 aaKnown RBP4.8□□□□□ -1.64
SDC2-204ENST00000519914 ZDHHC5Q9C0B5 715 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 RACGAP1Q9H0H5 632 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 OR52A5Q9H2C5 316 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 LINC00597Q9H2U6 94 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 TPK1Q9H3S4 243 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 RIBC2Q9H4K1 309 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 TRIM39Q9HCM9 518 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 HMG20AQ9NP66 347 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 FZD3Q9NPG1 666 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 WASH6PQ9NQA3 447 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 KRT84Q9NSB2 600 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 HCFC1R1Q9NWW0 138 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 OBP2AQ9NY56 170 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 ERVK-18Q9QC07 812 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 PSORS1C1Q9UIG5 152 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 OSGIN1Q9UJX0 560 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 ADAM29Q9UKF5 820 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 POFUT2Q9Y2G5 429 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 RWDD3Q9Y3V2 267 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 INSL6Q9Y581 213 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 PCDHGA2Q9Y5H1 932 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 PRRC2BQ5JSZ5 2229 aaKnown RBP4.8□□□□□ -1.64
SDC2-204ENST00000519914 C2orf16Q68DN1 1984 aa4.8□□□□□ -1.64
SDC2-204ENST00000519914 PLXND1Q9Y4D7 1925 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 PRAMEF25A6NGN4 478 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 OR2AG2A6NM03 316 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 ZAR1LA6NP61 321 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 CLCA1A8K7I4 914 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 HIDE1A8MVS5 230 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 CHURC1-FNTBB4DL54 471 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 GPR89AB7ZAQ6 455 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 hCG_2039718K7EN88 272 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 TAF4O00268 1085 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 TNFRSF11BO00300 401 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 KPNA4O00629 521 aaPredicted RBP4.79□□□□□ -1.64
SDC2-204ENST00000519914 MPZL2O60487 215 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 OXSR1O95747 527 aaPredicted RBP4.79□□□□□ -1.64
SDC2-204ENST00000519914 BPNT1O95861 308 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 TBX6O95947 436 aaPredicted RBP4.79□□□□□ -1.64
SDC2-204ENST00000519914 CDK1P06493 297 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 ALOX5P09917 674 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 GPR89BP0CG08 455 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 GSTT2P0CG29 244 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 GSTT2BP0CG30 244 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 HLA-EP13747 358 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 CSF2RAP15509 400 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 RHCEP18577 417 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 DDCP20711 480 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 XPAP23025 273 aaPredicted RBP4.79□□□□□ -1.64
SDC2-204ENST00000519914 KELP23276 732 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 PDHA2P29803 388 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 CD40LGP29965 261 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 RRM2P31350 389 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 FMO3P31513 532 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 CSTF2P33240 577 aaKnown RBP eCLIP4.79□□□□□ -1.643e-6■■■□□ 17.6
SDC2-204ENST00000519914 IDUAP35475 653 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 BMPR1AP36894 532 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 OPRL1P41146 370 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 ETV6P41212 452 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 SLC15A1P46059 708 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 SERPINB10P48595 397 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 ALDH9A1P49189 494 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 CDK6Q00534 326 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 REEP5Q00765 189 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 OCA2Q04671 838 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 PIGFQ07326 219 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 COX10Q12887 443 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 PPP1R8Q12972 351 aaKnown RBP4.79□□□□□ -1.64
SDC2-204ENST00000519914 PPIGQ13427 754 aaKnown RBP eCLIP4.79□□□□□ -1.642e-7■■■□□ 15.2
SDC2-204ENST00000519914 GTF2H3Q13889 308 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 SCARB2Q14108 478 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 ELAVL3Q14576 367 aaKnown RBP4.79□□□□□ -1.64
SDC2-204ENST00000519914 NUMA1Q14980 2115 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 NR1D2Q14995 579 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 LRRC26Q2I0M4 334 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 RGS21Q2M5E4 152 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 HNRNPA1L2Q32P51 320 aaKnown RBP4.79□□□□□ -1.64
SDC2-204ENST00000519914 TMEM201Q5SNT2 666 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.79□□□□□ -1.64
SDC2-204ENST00000519914 C9orf64Q5T6V5 341 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 ZNF770Q6IQ21 691 aaPredicted RBP4.79□□□□□ -1.64
SDC2-204ENST00000519914 TRIM40Q6P9F5 258 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 CD300LDQ6UXZ3 194 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 SLC46A3Q7Z3Q1 461 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 TMCO2Q7Z6W1 182 aaPredicted RBP4.79□□□□□ -1.64
SDC2-204ENST00000519914 TMPRSS11BQ86T26 416 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 SLC9B2Q86UD5 537 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 IGFN1Q86VF2 1251 aa4.79□□□□□ -1.64
SDC2-204ENST00000519914 GRAMD2AQ8IUY3 354 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms