RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	FKBP10	Q96AY3	582 aa		11.69	□□□□□ -0.54
SPIDR-210	ENST00000519362	TM4SF19	Q96DZ7	209 aa		11.69	□□□□□ -0.54
SPIDR-210	ENST00000519362	ZNF354B	Q96LW1	612 aa		11.69	□□□□□ -0.54
SPIDR-210	ENST00000519362	ZNF681	Q96N22	645 aa		11.69	□□□□□ -0.54
SPIDR-210	ENST00000519362	FCRL4	Q96PJ5	515 aa		11.69	□□□□□ -0.54
SPIDR-210	ENST00000519362	OR2A14	Q96R47	310 aa		11.69	□□□□□ -0.54
SPIDR-210	ENST00000519362	SIGLEC11	Q96RL6	698 aa		11.69	□□□□□ -0.54
SPIDR-210	ENST00000519362	SH3GL3	Q99963	347 aa		11.69	□□□□□ -0.54
SPIDR-210	ENST00000519362	SEMA3G	Q9NS98	782 aa		11.69	□□□□□ -0.54
SPIDR-210	ENST00000519362	SCN3B	Q9NY72	215 aa		11.69	□□□□□ -0.54
SPIDR-210	ENST00000519362	ERVK-18	Q9QC07	812 aa		11.69	□□□□□ -0.54
SPIDR-210	ENST00000519362	FBXW2	Q9UKT8	454 aa		11.69	□□□□□ -0.54
SPIDR-210	ENST00000519362	RNF6	Q9Y252	685 aa		11.69	□□□□□ -0.54
SPIDR-210	ENST00000519362	HCN4	Q9Y3Q4	1203 aa		11.69	□□□□□ -0.54
SPIDR-210	ENST00000519362	PCDHGA10	Q9Y5H3	936 aa		11.69	□□□□□ -0.54
SPIDR-210	ENST00000519362	GPC6	Q9Y625	555 aa	Predicted RBP	11.69	□□□□□ -0.54
SPIDR-210	ENST00000519362	EYS	Q5T1H1	3165 aa		11.69	□□□□□ -0.54
SPIDR-210	ENST00000519362	TRBV23OR9-2	A0A075B6M9	112 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362		A0A1W2PPW3	197 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	TOR1B	O14657	336 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	AXIN1	O15169	862 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	ZW10	O43264	779 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	SLC28A2	O43868	658 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	ERAL1	O75616	437 aa	Known RBP	11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	IGLV3-19	P01714	112 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	IGHV4-34	P06331	123 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	GP2	P55259	537 aa	Known RBP	11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	CSNK2B	P67870	215 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	TGM3	Q08188	693 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	GANAB	Q14697	944 aa	Known RBP	11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	GPR19	Q15760	415 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	ZNF750	Q32MQ0	723 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	PRRT3	Q5FWE3	981 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	FGD3	Q5JSP0	725 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	ZNF770	Q6IQ21	691 aa	Predicted RBP	11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	TCTN3	Q6NUS6	607 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	ABI3BP	Q7Z7G0	1075 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	ASPG	Q86U10	573 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	CCDC116	Q8IYX3	515 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	SLC22A18AS	Q8N1D0	253 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	MIPOL1	Q8TD10	442 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	PHF10	Q8WUB8	498 aa	Known RBP	11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	PROX1	Q92786	737 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	ALPK1	Q96QP1	1244 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	OR2A5	Q96R48	311 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	ZNF607	Q96SK3	696 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	MAPKAP1	Q9BPZ7	522 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	RHNO1	Q9BSD3	238 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	DCUN1D5	Q9BTE7	237 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	DGCR6L	Q9BY27	220 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	GPN2	Q9H9Y4	310 aa	Predicted RBP	11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	BCL2L10	Q9HD36	194 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	RASSF1	Q9NS23	344 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	LYAR	Q9NX58	379 aa	Known RBP	11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	ENTPD4	Q9Y227	616 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	MDC1	Q14676	2089 aa	Known RBP	11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	MYO10	Q9HD67	2058 aa		11.68	□□□□□ -0.54
SPIDR-210	ENST00000519362	TMEM247	A6NEH6	219 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	ZNF99	A8MXY4	864 aa	Predicted RBP	11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	NARS	O43776	548 aa	Known RBP	11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	SERPINB7	O75635	380 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	INMT	O95050	263 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	CCNB2	O95067	398 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	SMIM10L1	P0DMW3	83 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	BMP8B	P34820	402 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	RABIF	P47224	123 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	KHK	P50053	298 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	RGS1	Q08116	209 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	GPR18	Q14330	331 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	COLEC12	Q5KU26	742 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	MLIP	Q5VWP3	458 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	BHLHB9	Q6PI77	547 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	ZNF540	Q8NDQ6	660 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	OR4D11	Q8NGI4	311 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	UTP15	Q8TED0	518 aa	Known RBP	11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	HMGB4	Q8WW32	186 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	ZFPM2	Q8WW38	1151 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	XAGE5	Q8WWM1	108 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	IPCEF1	Q8WWN9	437 aa	Predicted RBP	11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	GAB3	Q8WWW8	586 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	FAM3C	Q92520	227 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	MOAP1	Q96BY2	351 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	SMIM10	Q96HG1	83 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	DHRS1	Q96LJ7	313 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	COL21A1	Q96P44	957 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	CSF3R	Q99062	836 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	CCDC90B	Q9GZT6	254 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	C6orf106	Q9H6K1	298 aa	Predicted RBP	11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	CCNB1IP1	Q9NPC3	277 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	PLCXD1	Q9NUJ7	323 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	ACAD8	Q9UKU7	415 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362		A0A1W2PS29	197 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362		H3BQ06	376 aa	Predicted RBP	11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	NOL3	O60936	208 aa	Known RBP	11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	VIP	P01282	170 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	HMGN2	P05204	90 aa	Known RBP	11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	FH	P07954	510 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	ALPPL2	P10696	532 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	UGT2B7	P16662	529 aa		11.67	□□□□□ -0.54
SPIDR-210	ENST00000519362	GABRB1	P18505	474 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 54 ms