RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 ADH7P40394 386 aa13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 PIK3CGP48736 1102 aa13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 TMED10P49755 219 aaKnown RBP13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 HNRNPH2P55795 449 aaKnown RBP13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 GPX6P59796 221 aa13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 DLG1Q12959 904 aa13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 SETDB1Q15047 1291 aa13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 EBPQ15125 230 aaKnown RBP13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 HSPB2Q16082 182 aa13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 NTRK2Q16620 822 aa13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 PRAMEF20Q5VT98 475 aa13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 C18orf63Q68DL7 685 aa13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 ARSKQ6UWY0 536 aa13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 WDR53Q7Z5U6 358 aaPredicted RBP13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 CMC1Q7Z7K0 106 aa13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 ULK2Q8IYT8 1036 aa13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 TAGAPQ8N103 731 aa13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 PPWD1Q96BP3 646 aaKnown RBP13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 DOHHQ9BU89 302 aa13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 SORBS1Q9BX66 1292 aaKnown RBP13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 ACTR8Q9H981 624 aa13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 GRPEL1Q9HAV7 217 aa13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 IGSF5Q9NSI5 407 aa13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 GRHL1Q9NZI5 618 aa13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 ACOT9Q9Y305 439 aa13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 CHCHD2Q9Y6H1 151 aaPredicted RBP13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 AKAP6Q13023 2319 aa13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 ITPR3Q14573 2671 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 A0A087X1B8 175 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 ANKRD33BA6NCL7 494 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 H0YIV9 168 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 HRKO00198 91 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 TP53I11O14683 189 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 PROM1O43490 865 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 RAD51CO43502 376 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 GFAPP14136 432 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 DLX5P56178 289 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 SLC37A1P57057 533 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 RPS13P62277 151 aaKnown RBP13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 CUL3Q13618 768 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 ZNF267Q14586 743 aaPredicted RBP13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 FAM83EQ2M2I3 478 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 OR52E8Q6IFG1 317 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 MRM1Q6IN84 353 aaKnown RBP13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 METTL2BQ6P1Q9 378 aaKnown RBP13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 CYP20A1Q6UW02 462 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 DGAT2L6Q6ZPD8 337 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 OR10G3Q8NGC4 313 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 RIT1Q92963 219 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 MTERF1Q99551 399 aaKnown RBP13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 RAB17Q9H0T7 212 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 SLC6A15Q9H2J7 730 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 DDX31Q9H8H2 851 aaKnown RBP13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 SNX15Q9NRS6 342 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 DNAJB12Q9NXW2 375 aaKnown RBP13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 ALKBH4Q9NXW9 302 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 PSD3Q9NYI0 1048 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 CNOT11Q9UKZ1 510 aaKnown RBP13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 EDARQ9UNE0 448 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 UTP11Q9Y3A2 253 aaKnown RBP13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 NINQ8N4C6 2090 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 NCKAP5O14513 1909 aa13.43□□□□□ -0.26
SCARNA20.5-201ENST00000516991 A0A0A6YYD5 115 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 FAM221AA4D161 298 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 DVL2O14641 736 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 CTAG2O75638 210 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 FAM155BO75949 473 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 SEMA3DO95025 777 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 RFPL3SP0C7P2 107 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 FAM58BPP0C7Q3 252 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 SLC35E2P0CK97 266 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 MTHFD2P13995 350 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 GDF1P27539 372 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 GMPRP36959 345 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 ASCL1P50553 236 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 ALDH18A1P54886 795 aaKnown RBP13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 RPP38P78345 283 aaKnown RBP13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 MRPS25P82663 173 aaKnown RBP13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 RPS6KA2Q15349 733 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 SF3B4Q15427 424 aaKnown RBP eCLIP13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 C6orf163Q5TEZ5 329 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 KLC3Q6P597 504 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 CCDC25Q86WR0 208 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 NUDT13Q86X67 352 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 LIX1LQ8IVB5 337 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 ZZZ3Q8IYH5 903 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 PM20D2Q8IYS1 436 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 RNF175Q8N4F7 328 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 CHDHQ8NE62 594 aaPredicted RBP13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 SPATA4Q8NEY3 305 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 FBF1Q8TES7 1133 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 KCTD4Q8WVF5 259 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 TP53INP1Q96A56 240 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 NXNL1Q96CM4 212 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 JSRP1Q96MG2 331 aaPredicted RBP13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 SECISBP2Q96T21 854 aaKnown RBP13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 FOXC2Q99958 501 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 ZNF717Q9BY31 904 aaPredicted RBP13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 PROK2Q9HC23 129 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 ASB4Q9Y574 426 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms