RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 C3orf30Q96M34 536 aa12.99□□□□□ -0.33
USP46-209ENST00000514536 CNPPD1Q9BV87 410 aa12.99□□□□□ -0.33
USP46-209ENST00000514536 LIN28AQ9H9Z2 209 aaKnown RBP12.99□□□□□ -0.33
USP46-209ENST00000514536 GIMAP2Q9UG22 337 aa12.99□□□□□ -0.33
USP46-209ENST00000514536 UTS2RQ9UKP6 389 aa12.99□□□□□ -0.33
USP46-209ENST00000514536 B3GNT3Q9Y2A9 372 aa12.99□□□□□ -0.33
USP46-209ENST00000514536 ATP6AP2A0A1C7CYW4 349 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 HRKO00198 91 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 DYRK3O43781 588 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 SLC28A2O43868 658 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 PRKNO60260 465 aaPredicted RBP12.98□□□□□ -0.33
USP46-209ENST00000514536 PEX11AO75192 247 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 ATP6AP2O75787 350 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 ZFAND5O76080 213 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 SNUPNO95149 360 aaKnown RBP12.98□□□□□ -0.33
USP46-209ENST00000514536 PORP16435 677 aaPredicted RBP12.98□□□□□ -0.33
USP46-209ENST00000514536 GSTM5P46439 218 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 MLF1P58340 268 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 ERVK-8P63133 956 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 HEPACAMQ14CZ8 416 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 CNRIP1Q96F85 164 aaPredicted RBP12.98□□□□□ -0.33
USP46-209ENST00000514536 EGLN2Q96KS0 407 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 SLAMF7Q9NQ25 335 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 PNPOQ9NVS9 261 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 ABI3Q9P2A4 366 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 ERVK-19Q9WJR5 959 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 ZNF780BQ9Y6R6 833 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 COL6A6A6NMZ7 2263 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 SPTA1P02549 2419 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 UQCRHLA0A096LP55 91 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 HMGB1P1B2RPK0 211 aaPredicted RBP12.98□□□□□ -0.33
USP46-209ENST00000514536 CSNK2A2P19784 350 aaPredicted RBP12.98□□□□□ -0.33
USP46-209ENST00000514536 NT5EP21589 574 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 TACR1P25103 407 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 GALNSP34059 522 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 CD96P40200 585 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 RPL38P63173 70 aaKnown RBP12.98□□□□□ -0.33
USP46-209ENST00000514536 PDCD2Q16342 344 aaPredicted RBP12.98□□□□□ -0.33
USP46-209ENST00000514536 XKR7Q5GH72 579 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 ATG16L1Q676U5 607 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 FAM71E1Q6IPT2 247 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 HSDL2Q6YN16 418 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 TRIM42Q8IWZ5 723 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 Q8NA96 180 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.98□□□□□ -0.33
USP46-209ENST00000514536 EXOSC8Q96B26 276 aaKnown RBP12.98□□□□□ -0.33
USP46-209ENST00000514536 ART5Q96L15 291 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 PPP1R36Q96LQ0 422 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 PPP3R2Q96LZ3 170 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 CCT7Q99832 543 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 RNF32Q9H0A6 362 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.98□□□□□ -0.33
USP46-209ENST00000514536 EPN3Q9H201 632 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 MANSC1Q9H8J5 431 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 CXorf21Q9HAI6 301 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 MYNNQ9NPC7 610 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 PFDN4Q9NQP4 134 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 THAP1Q9NVV9 213 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 ZNF446Q9NWS9 450 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 ANKRD10Q9NXR5 420 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 COPS7AQ9UBW8 275 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 BAIAP2L1Q9UHR4 511 aa12.98□□□□□ -0.33
USP46-209ENST00000514536 WBP11Q9Y2W2 641 aaKnown RBP12.98□□□□□ -0.33
USP46-209ENST00000514536 OR5H15A6NDH6 313 aa12.97□□□□□ -0.33
USP46-209ENST00000514536 TMEM200CA6NKL6 621 aa12.97□□□□□ -0.33
USP46-209ENST00000514536 TTLL8A6PVC2 850 aa12.97□□□□□ -0.33
USP46-209ENST00000514536 GABRR3A8MPY1 467 aa12.97□□□□□ -0.33
USP46-209ENST00000514536 IGKV3-11P04433 115 aa12.97□□□□□ -0.33
USP46-209ENST00000514536 JUNP05412 331 aaKnown RBP12.97□□□□□ -0.33
USP46-209ENST00000514536 CT62P0C5K7 136 aa12.97□□□□□ -0.33
USP46-209ENST00000514536 DDCP20711 480 aa12.97□□□□□ -0.33
USP46-209ENST00000514536 PTGER1P34995 402 aa12.97□□□□□ -0.33
USP46-209ENST00000514536 MLLT10P55197 1068 aa12.97□□□□□ -0.33
USP46-209ENST00000514536 RNF4P78317 190 aa12.97□□□□□ -0.33
USP46-209ENST00000514536 DUSP2Q05923 314 aa12.97□□□□□ -0.33
USP46-209ENST00000514536 TLR1Q15399 786 aa12.97□□□□□ -0.33
USP46-209ENST00000514536 PRSS53Q2L4Q9 553 aa12.97□□□□□ -0.33
USP46-209ENST00000514536 SPRED3Q2MJR0 410 aa12.97□□□□□ -0.33
USP46-209ENST00000514536 C16orf47Q6ZP98 133 aaPredicted RBP12.97□□□□□ -0.33
USP46-209ENST00000514536 GALNT12Q8IXK2 581 aa12.97□□□□□ -0.33
USP46-209ENST00000514536 LGI4Q8N135 537 aa12.97□□□□□ -0.33
USP46-209ENST00000514536 TUBGCP3Q96CW5 907 aa12.97□□□□□ -0.33
USP46-209ENST00000514536 C19orf60Q96EN9 201 aa12.97□□□□□ -0.33
USP46-209ENST00000514536 FBXL20Q96IG2 436 aa12.97□□□□□ -0.33
USP46-209ENST00000514536 FCRL1Q96LA6 429 aa12.97□□□□□ -0.33
USP46-209ENST00000514536 ZNF681Q96N22 645 aa12.97□□□□□ -0.33
USP46-209ENST00000514536 UTP23Q9BRU9 249 aaKnown RBP12.97□□□□□ -0.33
USP46-209ENST00000514536 HAO1Q9UJM8 370 aa12.97□□□□□ -0.33
USP46-209ENST00000514536 TMED5Q9Y3A6 229 aa12.97□□□□□ -0.33
USP46-209ENST00000514536 J3QKU1 62 aa12.96□□□□□ -0.33
USP46-209ENST00000514536 WWP2O00308 870 aa12.96□□□□□ -0.33
USP46-209ENST00000514536 FCHO1O14526 889 aa12.96□□□□□ -0.33
USP46-209ENST00000514536 SNNO75324 88 aaPredicted RBP12.96□□□□□ -0.33
USP46-209ENST00000514536 ITGA10O75578 1167 aa12.96□□□□□ -0.33
USP46-209ENST00000514536 SORBS2O94875 1100 aaKnown RBP12.96□□□□□ -0.33
USP46-209ENST00000514536 SDC1P18827 310 aa12.96□□□□□ -0.33
USP46-209ENST00000514536 TNFSF10P50591 281 aa12.96□□□□□ -0.33
USP46-209ENST00000514536 OC90Q02509 493 aaPredicted RBP12.96□□□□□ -0.33
USP46-209ENST00000514536 TUBA3CQ13748 450 aa12.96□□□□□ -0.33
USP46-209ENST00000514536 ZNF169Q14929 603 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 378.2 ms