RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 TYK2P29597 1187 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 TLE1Q04724 770 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 MTAPQ13126 283 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 RAB31Q13636 194 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 VEZF1Q14119 521 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM198Q66K66 360 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 ABHD15Q6UXT9 468 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF598Q86UK7 904 aaKnown RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 CNTN4Q8IWV2 1026 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 LRRC34Q8IZ02 419 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 MCOLN2Q8IZK6 566 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 RNF152Q8N8N0 203 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 OR5B3Q8NH48 314 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 CCDC107Q8WV48 283 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 LGALS12Q96DT0 336 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 TOE1Q96GM8 510 aaKnown RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 PDLIM5Q96HC4 596 aaKnown RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF48Q96MX3 618 aaPredicted RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 NTN4Q9HB63 628 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 UFSP2Q9NUQ7 469 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 PRMT7Q9NVM4 692 aaPredicted RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 SLC9A2Q9UBY0 812 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 FBXL7Q9UJT9 491 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 TBC1D24Q9ULP9 559 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 PPP2R2CQ9Y2T4 447 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 SLCO1B1Q9Y6L6 691 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 CAPN6Q9Y6Q1 641 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 SYNGAP1Q96PV0 1343 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 TCAF2A6NFQ2 919 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM221A6NGB7 291 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 TMPRSS2O15393 492 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 CNOT3O75175 753 aaKnown RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 F3P13726 295 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 NQO2P16083 231 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ENGP17813 658 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 MSH3P20585 1137 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 GSTM3P21266 225 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 PRDX2P32119 198 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 DCTDP32321 178 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 HTR5AP47898 357 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 CD97P48960 835 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 CDH4P55283 916 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ID2Q02363 134 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 PPIDQ08752 370 aaKnown RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 NAB1Q13506 487 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 PSMD5Q16401 504 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 LSM12Q3MHD2 195 aaKnown RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 LEXMQ3ZCV2 418 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 TYW3Q6IPR3 259 aaKnown RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 C6orf89Q6UWU4 347 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 CLNKQ7Z7G1 428 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 LDB1Q86U70 411 aaPredicted RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 OR8K1Q8NGG5 319 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 DTD1Q8TEA8 209 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 TNFRSF14Q92956 283 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 SLC38A4Q969I6 547 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 TAAR1Q96RJ0 339 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 C6orf62Q9GZU0 229 aaPredicted RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 OR10A5Q9H207 317 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 EML4Q9HC35 981 aaKnown RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 EXD2Q9NVH0 621 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 DMAC2Q9NW81 257 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 SIRT5Q9NXA8 310 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 THUMPD1Q9NXG2 353 aaKnown RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 CISD1Q9NZ45 108 aaKnown RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 KIAA1456Q9P272 454 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 SLC45A2Q9UMX9 530 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ANGPT4Q9Y264 503 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 MEMO1Q9Y316 297 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 SF3B1O75533 1304 aaKnown RBP eCLIP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ADGRA2Q96PE1 1338 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM247A6NEH6 219 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 SLC38A8A6NNN8 435 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 SOBPA7XYQ1 873 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 SMLR1H3BR10 107 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 MYO1FO00160 1098 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 TRIM24O15164 1050 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 XRCC2O43543 280 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 WDR47O94967 919 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 GYPCP04921 128 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 FABP1P07148 127 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 IRF2P14316 349 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 FUT1P19526 365 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 TBXAS1P24557 533 aaPredicted RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 CLRN1P58418 232 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 RAB11AP62491 216 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 CACNG1Q06432 222 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 SMARCB1Q12824 385 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 RAB11BQ15907 218 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 NDUFA9Q16795 377 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 PTCHD3Q3KNS1 767 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 EPC2Q52LR7 807 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 LIPKQ5VXJ0 399 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 ANKRD16Q6P6B7 361 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM88Q6PEY1 159 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 SLC29A4Q7RTT9 530 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 GCNT2Q8N0V5 402 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM132CQ8N3T6 1108 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 PTGR2Q8N8N7 351 aaPredicted RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 OR8J1Q8NGP2 316 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms