RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 CTBP2P56545 445 aa16.25■□□□□ 0.19
SQSTM1-211ENST00000506690 B4GALNT1Q00973 533 aa16.25■□□□□ 0.19
SQSTM1-211ENST00000506690 DOC2AQ14183 400 aa16.25■□□□□ 0.19
SQSTM1-211ENST00000506690 POU4F3Q15319 338 aa16.25■□□□□ 0.19
SQSTM1-211ENST00000506690 GRK1Q15835 563 aa16.25■□□□□ 0.19
SQSTM1-211ENST00000506690 SLC5A12Q1EHB4 618 aa16.25■□□□□ 0.19
SQSTM1-211ENST00000506690 MORN1Q5T089 497 aa16.25■□□□□ 0.19
SQSTM1-211ENST00000506690 ZNF57Q68EA5 555 aaPredicted RBP16.25■□□□□ 0.19
SQSTM1-211ENST00000506690 LRRC17Q8N6Y2 441 aa16.25■□□□□ 0.19
SQSTM1-211ENST00000506690 MED28Q9H204 178 aa16.25■□□□□ 0.19
SQSTM1-211ENST00000506690 PTTG3PQ9NZH4 202 aa16.25■□□□□ 0.19
SQSTM1-211ENST00000506690 ANGPT4Q9Y264 503 aa16.25■□□□□ 0.19
SQSTM1-211ENST00000506690 FCF1Q9Y324 198 aaKnown RBP16.25■□□□□ 0.19
SQSTM1-211ENST00000506690 MAP4K5Q9Y4K4 846 aa16.25■□□□□ 0.19
SQSTM1-211ENST00000506690 PLXNB3Q9ULL4 1909 aa16.25■□□□□ 0.19
SQSTM1-211ENST00000506690 TRDV1A0A1B0GX56 115 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 C7orf66A4D0T2 115 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 OR10H3O60404 316 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 SEMA7AO75326 666 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 HNF1BP35680 557 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 AP1S2P56377 157 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 LRRC32Q14392 662 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 GPR176Q14439 515 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 ZNF284Q2VY69 593 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 CCSAPQ6IQ19 270 aaPredicted RBP16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 ADNP2Q6IQ32 1131 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 BRAT1Q6PJG6 821 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 C16orf59Q7L2K0 433 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 CBARPQ8N350 705 aaPredicted RBP16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 SDR16C5Q8N3Y7 309 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 CELF5Q8N6W0 485 aaKnown RBP16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 DNAJC5GQ8N7S2 189 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 LSM14AQ8ND56 463 aaKnown RBP16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 OR11H7Q8NGC8 314 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 UFD1Q92890 307 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 FGF11Q92914 225 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 POLR2J3Q9H1A7 115 aaKnown RBP16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 SLCO1C1Q9NYB5 712 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 ZDHHC3Q9NYG2 299 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 TVP23BQ9NYZ1 205 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 DOCK3Q8IZD9 2030 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 NINQ8N4C6 2090 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 E7EQ34 232 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 SLC16A5O15375 505 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 SH3BGRLO75368 114 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 PSIP1O75475 530 aaKnown RBP16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 TPPPO94811 219 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 GAAP10253 952 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 ATF4P18848 351 aaPredicted RBP16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 TIA1P31483 386 aaKnown RBP eCLIP16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 ATP12AP54707 1039 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 SP140Q13342 867 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 SNTA1Q13424 505 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 ADAM15Q13444 863 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 DSG2Q14126 1118 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 CCL14Q16627 93 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 DCST1Q5T197 706 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 PGBD2Q6P3X8 592 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 GATAD2BQ8WXI9 593 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 ZNF582Q96NG8 517 aaPredicted RBP16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 GHITMQ9H3K2 345 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 CWH43Q9H720 699 aa16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 CUEDC1Q9NWM3 386 aaPredicted RBP16.24■□□□□ 0.19
SQSTM1-211ENST00000506690 HELZP42694 1942 aaKnown RBP16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 GNG14A0A1W2PPG7 69 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 FAAHO00519 579 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 KLKB1P03952 638 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 MPC1LP0DKB6 136 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 ZNF8P17098 575 aaPredicted RBP16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 CLCNKAP51800 687 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 GALEQ14376 348 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 DUSP6Q16828 381 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 SPIN4Q56A73 249 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 GRHL2Q6ISB3 625 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 PRSS42Q7Z5A4 293 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 CDH24Q86UP0 819 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 ZNF280BQ86YH2 543 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 IQCF1Q8N6M8 205 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 ZNF655Q8N720 491 aaPredicted RBP16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 SCMH1Q96GD3 660 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 TMEM121BQ9BXQ6 578 aaPredicted RBP16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 REEP4Q9H6H4 257 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 MRPS18AQ9NVS2 196 aaKnown RBP16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 SRRDQ9UH36 339 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 PIPSLA2A3N6 862 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 RRASP10301 218 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 DDCP20711 480 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 IL32P24001 234 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 BMP8BP34820 402 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 ATP5C1P36542 298 aaKnown RBP16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 AP1S1P61966 158 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 EFNB1P98172 346 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 KLHL12Q53G59 568 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 BCL2L15Q5TBC7 163 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 MZT2AQ6P582 158 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 TPGS1Q6ZTW0 290 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 PLEKHM3Q6ZWE6 761 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 BMP8AQ7Z5Y6 402 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 GPAT4Q86UL3 456 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms