RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 CPMP14384 443 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 ALDH9A1P49189 494 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 XKP51811 444 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 SLC18A1P54219 525 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 ABCE1P61221 599 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 ERVK-8P63133 956 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 ZNF763Q0D2J5 394 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 TLR1Q15399 786 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 NR6A1Q15406 480 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 TTMPQ5BVD1 217 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 XKR7Q5GH72 579 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 HHATQ5VTY9 493 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 NOXRED1Q6NXP6 359 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 HDXQ7Z353 690 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 DDIASQ8IXT1 998 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 ZNF781Q8N8C0 355 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 FAM76AQ8TAV0 307 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 KLHL29Q96CT2 875 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 FBXL20Q96IG2 436 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 FCRL1Q96LA6 429 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 C3orf30Q96M34 536 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 ZNF681Q96N22 645 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 SH3GL2Q99962 352 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 PAIP2Q9BPZ3 127 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 LIN28AQ9H9Z2 209 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 LRTM1Q9HBL6 345 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 C1orf109Q9NX04 203 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 GIMAP2Q9UG22 337 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 ERVK-19Q9WJR5 959 aa16.96■□□□□ 0.31
PDLIM7-216ENST00000506537 UBR5O95071 2799 aaPredicted RBP16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 SEC22BO75396 215 aa16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 SKAP2O75563 359 aaPredicted RBP16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 ERAL1O75616 437 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 ZFAND5O76080 213 aa16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 JUNP05412 331 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 CT62P0C5K7 136 aa16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 TACR1P25103 407 aa16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 GALNSP34059 522 aa16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 PTGER1P34995 402 aa16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 FEN1P39748 380 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 CD96P40200 585 aa16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 INPP5JQ15735 1006 aaPredicted RBP16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 PRSS53Q2L4Q9 553 aa16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 HSDL2Q6YN16 418 aa16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 C9orf40Q8IXQ3 194 aa16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 MDS2Q8NDY4 140 aa16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 CDC26Q8NHZ8 85 aa16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 RIT1Q92963 219 aa16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 CNRIP1Q96F85 164 aaPredicted RBP16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 METTL2AQ96IZ6 378 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 SIGLEC12Q96PQ1 595 aa16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 CNPPD1Q9BV87 410 aa16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 CXorf21Q9HAI6 301 aa16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 MYNNQ9NPC7 610 aa16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 UTS2RQ9UKP6 389 aa16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 EXO1Q9UQ84 846 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 NTNG1Q9Y2I2 539 aa16.95■□□□□ 0.3
PDLIM7-216ENST00000506537 SHANK1Q9Y566 2161 aa16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 TRAV17A0A0B4J275 112 aa16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 SASH3O75995 380 aa16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 DRD2P14416 443 aa16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 PORP16435 677 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 GRK2P25098 689 aa16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 SOX18P35713 384 aa16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 GSTM5P46439 218 aa16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 SLC1A6P48664 564 aa16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 HK2P52789 917 aa16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 RPL38P63173 70 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 RNF4P78317 190 aa16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 BST1Q10588 318 aa16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 ZNF267Q14586 743 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 RFTN2Q52LD8 501 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 FAM71E1Q6IPT2 247 aa16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 OR8K3Q8NH51 312 aa16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 CPT1CQ8TCG5 803 aa16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 MIB2Q96AX9 1013 aa16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 C19orf60Q96EN9 201 aa16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 ATP6V1G3Q96LB4 118 aa16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 UTP23Q9BRU9 249 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 VIPAS39Q9H9C1 493 aa16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 ABI3Q9P2A4 366 aa16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 COPS7AQ9UBW8 275 aa16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 HAO1Q9UJM8 370 aa16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 NBASA2RRP1 2371 aa16.94■□□□□ 0.3
PDLIM7-216ENST00000506537 ITGA10O75578 1167 aa16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 NEURL1O76050 574 aa16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 ATP1B1P05026 303 aa16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 SDC1P18827 310 aa16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 DDCP20711 480 aa16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 SSTR4P31391 388 aa16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 TRHRP34981 398 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 SLC37A1P57057 533 aa16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 FOXK1P85037 733 aa16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 MGAT2Q10469 447 aa16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 STX3Q13277 289 aa16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 HEPACAMQ14CZ8 416 aa16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 OR1C1Q15619 314 aa16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 LTB4RQ15722 352 aa16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 IGFBP7Q16270 282 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms