RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 PLIN5Q00G26 463 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 TAGLNQ01995 201 aaKnown RBP6.78□□□□□ -1.32
GYPB-206ENST00000506516 FOLH1Q04609 750 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 STX3Q13277 289 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 HEPACAMQ14CZ8 416 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 CHI3L2Q15782 390 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 PLEKHN1Q494U1 663 aaPredicted RBP6.78□□□□□ -1.32
GYPB-206ENST00000506516 ACER2Q5QJU3 275 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 SH2D4BQ5SQS7 431 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 NDUFAF5Q5TEU4 345 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 C6orf163Q5TEZ5 329 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 ZNF468Q5VIY5 522 aaPredicted RBP6.78□□□□□ -1.32
GYPB-206ENST00000506516 CLEC6AQ6EIG7 209 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 OR52E8Q6IFG1 317 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 RNF165Q6ZSG1 346 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 ZCCHC23Q6ZST2 131 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 RPS19BP1Q86WX3 136 aaKnown RBP6.78□□□□□ -1.32
GYPB-206ENST00000506516 OR4N5Q8IXE1 308 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 DDIASQ8IXT1 998 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 ST13P4Q8IZP2 240 aaPredicted RBP6.78□□□□□ -1.32
GYPB-206ENST00000506516 KIRREL3Q8IZU9 778 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 LGI4Q8N135 537 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 HORMAD2Q8N7B1 307 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 RBMXL3Q8N7X1 1067 aaKnown RBP6.78□□□□□ -1.32
GYPB-206ENST00000506516 ANKRD42Q8N9B4 389 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 NFAM1Q8NET5 270 aaPredicted RBP6.78□□□□□ -1.32
GYPB-206ENST00000506516 B3GNT7Q8NFL0 401 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 OR5L2Q8NGL0 311 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 OR1N1Q8NGS0 311 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 OR14A16Q8NHC5 309 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 FAM76AQ8TAV0 307 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 RIT1Q92963 219 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 PNPLA2Q96AD5 504 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 TM4SF18Q96CE8 201 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 VMP1Q96GC9 406 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 APIPQ96GX9 242 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 ART5Q96L15 291 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.78□□□□□ -1.32
GYPB-206ENST00000506516 CDCP1Q9H5V8 836 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 ZBTB20Q9HC78 741 aaPredicted RBP6.78□□□□□ -1.32
GYPB-206ENST00000506516 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.78□□□□□ -1.32
GYPB-206ENST00000506516 SIRT5Q9NXA8 310 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 COPS7AQ9UBW8 275 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 PPIEQ9UNP9 301 aaKnown RBP6.78□□□□□ -1.32
GYPB-206ENST00000506516 FIS1Q9Y3D6 152 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 PCDHA9Q9Y5H5 950 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 ZNF780BQ9Y6R6 833 aa6.78□□□□□ -1.32
GYPB-206ENST00000506516 BOD1L1Q8NFC6 3051 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 IGSF10Q6WRI0 2623 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 SEC16AO15027 2179 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 CHD6Q8TD26 2715 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 MYOCOSA0A1B0GUC4 107 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 TMEM120BA0PK00 339 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 TMEM114B3SHH9 223 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 FCHO1O14526 889 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 EREGO14944 169 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 FGF17O60258 216 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 PRKRAO75569 313 aaKnown RBP6.77□□□□□ -1.33
GYPB-206ENST00000506516 ERAL1O75616 437 aaKnown RBP6.77□□□□□ -1.33
GYPB-206ENST00000506516 AIFM1O95831 613 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 SERPINE1P05121 402 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 ANXA4P09525 319 aaPredicted RBP6.77□□□□□ -1.33
GYPB-206ENST00000506516 LINC00032P0C843 101 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 DHRS4L1P0CG22 281 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 CHN1P15882 459 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 H2AFXP16104 143 aaPredicted RBP6.77□□□□□ -1.33
GYPB-206ENST00000506516 PORP16435 677 aaPredicted RBP6.77□□□□□ -1.33
GYPB-206ENST00000506516 CSNK2A2P19784 350 aaPredicted RBP6.77□□□□□ -1.33
GYPB-206ENST00000506516 PRPH2P23942 346 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 TIA1P31483 386 aaKnown RBP eCLIP6.77□□□□□ -1.33
GYPB-206ENST00000506516 SOX18P35713 384 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 MAP2K3P46734 347 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 SLC1A6P48664 564 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 ALDH9A1P49189 494 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 GPR143P51810 404 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 XKP51811 444 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 ABCE1P61221 599 aaKnown RBP6.77□□□□□ -1.33
GYPB-206ENST00000506516 IGLV3-21P80748 117 aaPredicted RBP6.77□□□□□ -1.33
GYPB-206ENST00000506516 ID2Q02363 134 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 C2orf80Q0P641 193 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 NADK2Q4G0N4 442 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 AGBL2Q5U5Z8 902 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 KANK2Q63ZY3 851 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 B3GNTL1Q67FW5 361 aaPredicted RBP6.77□□□□□ -1.33
GYPB-206ENST00000506516 SLC6A19Q695T7 634 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 NOXRED1Q6NXP6 359 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 SLC48A1Q6P1K1 146 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 GALNT18Q6P9A2 607 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 HSDL2Q6YN16 418 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 Q6ZS92 163 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 SYT9Q86SS6 491 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 CRLF3Q8IUI8 442 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 TRIM42Q8IWZ5 723 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 SAMD14Q8IZD0 417 aaPredicted RBP6.77□□□□□ -1.33
GYPB-206ENST00000506516 KIF2BQ8N4N8 673 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 APCDD1LQ8NCL9 501 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 OR6Y1Q8NGX8 325 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 AGR3Q8TD06 166 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 C16orf78Q8WTQ4 265 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 PTPMT1Q8WUK0 201 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms