RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 PRAMEF10O60809 474 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 CLDN11O75508 207 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 SCO1O75880 301 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 ZNF250P15622 560 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 BPIP17213 487 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 DDCP20711 480 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 AOAHP28039 575 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 BDKRB1P46663 353 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 PCBP3P57721 371 aaKnown RBP15.12■□□□□ 0.01
SCLT1-208ENST00000506368 SPIN4Q56A73 249 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.12■□□□□ 0.01
SCLT1-208ENST00000506368 OR7D4Q8NG98 312 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 SLC6A18Q96N87 628 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 GHITMQ9H3K2 345 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 ZSCAN32Q9NX65 697 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 ATP6V1HQ9UI12 483 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 FNDC3AQ9Y2H6 1198 aaKnown RBP15.12■□□□□ 0.01
SCLT1-208ENST00000506368 PCDHB7Q9Y5E2 793 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 PRAMEF25A6NGN4 478 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 MEIS3P2A8K0S8 358 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 GABRR3A8MPY1 467 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 TNRC18O15417 2968 aaPredicted RBP15.12■□□□□ 0.01
SCLT1-208ENST00000506368 TREHO43280 583 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 HPGDSO60760 199 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 OPN1SWP03999 348 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 HLA-DPB1P04440 258 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 MPC1LP0DKB6 136 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 PRKACAP17612 351 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 IDSP22304 550 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 SLC6A4P31645 630 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 CLCNKAP51800 687 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 EEF1A2Q05639 463 aaKnown RBP15.12■□□□□ 0.01
SCLT1-208ENST00000506368 TUSC3Q13454 348 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 GAB1Q13480 694 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 EXOSC2Q13868 293 aaKnown RBP15.12■□□□□ 0.01
SCLT1-208ENST00000506368 P2RY14Q15391 338 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 ARHGAP15Q53QZ3 475 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 RTL4Q6ZR62 310 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 NXPE2Q96DL1 559 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 PAAF1Q9BRP4 392 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 DPAGT1Q9H3H5 408 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 C1GALT1Q9NS00 363 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 TRBC2A0A5B9 178 aa15.11■□□□□ 0.01
SCLT1-208ENST00000506368 KRBOX1C9JBD0 128 aa15.11■□□□□ 0.01
SCLT1-208ENST00000506368 CHST10O43529 356 aa15.11■□□□□ 0.01
SCLT1-208ENST00000506368 HRO43593 1189 aa15.11■□□□□ 0.01
SCLT1-208ENST00000506368 SOD1P00441 154 aa15.11■□□□□ 0.01
SCLT1-208ENST00000506368 ARAFP10398 606 aa15.11■□□□□ 0.01
SCLT1-208ENST00000506368 ENPP1P22413 925 aa15.11■□□□□ 0.01
SCLT1-208ENST00000506368 NSG1P42857 185 aa15.11■□□□□ 0.01
SCLT1-208ENST00000506368 CCT3P49368 545 aaKnown RBP15.11■□□□□ 0.01
SCLT1-208ENST00000506368 ACSM1Q08AH1 577 aa15.11■□□□□ 0.01
SCLT1-208ENST00000506368 SEC23BQ15437 767 aa15.11■□□□□ 0.01
SCLT1-208ENST00000506368 ATAT1Q5SQI0 421 aa15.11■□□□□ 0.01
SCLT1-208ENST00000506368 C10orf120Q5SQS8 335 aa15.11■□□□□ 0.01
SCLT1-208ENST00000506368 DCST1Q5T197 706 aa15.11■□□□□ 0.01
SCLT1-208ENST00000506368 CD300LGQ6UXG3 332 aa15.11■□□□□ 0.01
SCLT1-208ENST00000506368 CD300LDQ6UXZ3 194 aa15.11■□□□□ 0.01
SCLT1-208ENST00000506368 CHST9Q7L1S5 443 aa15.11■□□□□ 0.01
SCLT1-208ENST00000506368 GLCCI1Q86VQ1 547 aa15.11■□□□□ 0.01
SCLT1-208ENST00000506368 CBARPQ8N350 705 aaPredicted RBP15.11■□□□□ 0.01
SCLT1-208ENST00000506368 ZNF655Q8N720 491 aaPredicted RBP15.11■□□□□ 0.01
SCLT1-208ENST00000506368 RFT1Q96AA3 541 aa15.11■□□□□ 0.01
SCLT1-208ENST00000506368 KCTD12Q96CX2 325 aaKnown RBP15.11■□□□□ 0.01
SCLT1-208ENST00000506368 PDXPQ96GD0 296 aa15.11■□□□□ 0.01
SCLT1-208ENST00000506368 SPON2Q9BUD6 331 aa15.11■□□□□ 0.01
SCLT1-208ENST00000506368 ERVMER34-1Q9H9K5 563 aa15.11■□□□□ 0.01
SCLT1-208ENST00000506368 PLXNA4Q9HCM2 1894 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 C17orf102A2RUQ5 167 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 MGAT4DA6NG13 374 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 YY2O15391 372 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 ZNF623O75123 536 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 TNFRSF1BP20333 461 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 DGKGP49619 791 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 GPR176Q14439 515 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 SNAPC1Q16533 368 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 UBE2R2Q712K3 238 aaPredicted RBP15.1■□□□□ 0.01
SCLT1-208ENST00000506368 FGD2Q7Z6J4 655 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 LRRC28Q86X40 367 aaPredicted RBP15.1■□□□□ 0.01
SCLT1-208ENST00000506368 MIB1Q86YT6 1006 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 SRFBP1Q8NEF9 429 aaKnown RBP15.1■□□□□ 0.01
SCLT1-208ENST00000506368 NFKBIDQ8NI38 313 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 WDR20Q8TBZ3 569 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 CRLS1Q9UJA2 301 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 SCP2D1Q9UJQ7 156 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 ZNF222Q9UK12 451 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 CBLCQ9ULV8 474 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 PRSS21Q9Y6M0 314 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 HEPACAM2A8MVW5 462 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 H0YIV9 168 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 J3KTA2 159 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 KPNA5O15131 536 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 ACP2P11117 423 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 BMP8BP34820 402 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 MMP12P39900 470 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 PNLIPRP1P54315 467 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 RPS25P62851 125 aaKnown RBP15.1■□□□□ 0.01
SCLT1-208ENST00000506368 CHIT1Q13231 466 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 GDF6Q6KF10 455 aaPredicted RBP15.1■□□□□ 0.01
SCLT1-208ENST00000506368 BMP8AQ7Z5Y6 402 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms