RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 TRAPPC4Q9Y296 219 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 PCDHB7Q9Y5E2 793 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 GON4LQ3T8J9 2241 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 GLYATL1P3A0A0U1RQE8 302 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 HYKKA2RU49 373 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 FAM183AA6NL82 134 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 C5orf58C9J3I9 102 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 RTCAO00442 366 aaKnown RBP7.25□□□□□ -1.25
NEDD9-208ENST00000504387 KDM4BO94953 1096 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 BPIP17213 487 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 LHCGRP22888 699 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 RAB14P61106 215 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 COX10Q12887 443 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 GPR176Q14439 515 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 GINS1Q14691 196 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 HYAL4Q2M3T9 481 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 TTLL9Q3SXZ7 439 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 RTP2Q5QGT7 225 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 GCNT6Q5T4J0 391 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 RSPO2Q6UXX9 243 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-208ENST00000504387 CREB3L2Q70SY1 520 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 TMPRSS11BQ86T26 416 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 NEIL3Q8TAT5 605 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 AP2M1Q96CW1 435 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 CMTM7Q96FZ5 175 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 PIP5K1AQ99755 562 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 MND1Q9BWT6 205 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 TAPBPLQ9BX59 468 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 SLC29A3Q9BZD2 475 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 KCNK12Q9HB15 430 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 OR6C2Q9NZP2 312 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 HCN2Q9UL51 889 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 AP3M1Q9Y2T2 418 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 SCN4AP35499 1836 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 ZC3H12DA2A288 527 aaKnown RBP7.24□□□□□ -1.25
NEDD9-208ENST00000504387 PRR23AA6NEV1 266 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 TMEM202A6NGA9 273 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 FFAR1O14842 300 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 SLC30A4O14863 429 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 PIP5K1CO60331 668 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 KLKB1P03952 638 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 IFNW1P05000 195 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 CKMP06732 381 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 OR12D1P0DN82 309 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 PRKAR2AP13861 404 aaKnown RBP7.24□□□□□ -1.25
NEDD9-208ENST00000504387 POU3F2P20265 443 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-208ENST00000504387 GIFP27352 417 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 AOAHP28039 575 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 OPRD1P41143 372 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 RPL35P42766 123 aaKnown RBP7.24□□□□□ -1.25
NEDD9-208ENST00000504387 AP2S1P53680 142 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-208ENST00000504387 ARF5P84085 180 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 TAGLNQ01995 201 aaKnown RBP7.24□□□□□ -1.25
NEDD9-208ENST00000504387 RGS1Q08116 209 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 HSPB3Q12988 150 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 EIF4HQ15056 248 aaKnown RBP7.24□□□□□ -1.25
NEDD9-208ENST00000504387 CLLU1OSQ5K130 101 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 GARNL3Q5VVW2 1013 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 SFRP4Q6FHJ7 346 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-208ENST00000504387 C17orf107Q6ZR85 190 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 RASSF6Q6ZTQ3 369 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 PRSS45Q7RTY3 260 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 KCTD20Q7Z5Y7 419 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 SLC51BQ86UW2 128 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 TMEM173Q86WV6 379 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-208ENST00000504387 TCTE3Q8IZS6 198 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 SAMD12Q8N8I0 201 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 GDPD1Q8N9F7 314 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 GPR26Q8NDV2 337 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 TOR1AIP2Q8NFQ8 470 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 SCAMP4Q969E2 229 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 LINC00052Q96N35 136 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 RAD9AQ99638 391 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 SGIP1Q9BQI5 828 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 NTMT1Q9BV86 223 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 CDCA4Q9BXL8 241 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 QRSL1Q9H0R6 528 aaKnown RBP7.24□□□□□ -1.25
NEDD9-208ENST00000504387 PDFQ9HBH1 243 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 ENAMQ9NRM1 1142 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 SPATA6Q9NWH7 488 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-208ENST00000504387 NLGN3Q9NZ94 848 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 TRPS1Q9UHF7 1281 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 PCDHB8Q9UN66 801 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 FLVCR2Q9UPI3 526 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 TP53BP1Q12888 1972 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-208ENST00000504387 PARP14Q460N5 1801 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 H3BSH0 61 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 DUSP11O75319 330 aaKnown RBP7.24□□□□□ -1.25
NEDD9-208ENST00000504387 SEMG1P04279 462 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 KLK1P06870 262 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 NR2F6P10588 404 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 ELK1P19419 428 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 MAPK1P28482 360 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 HNF1BP35680 557 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 MRPL19P49406 292 aaKnown RBP7.24□□□□□ -1.25
NEDD9-208ENST00000504387 OR10A3P58181 314 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 YBEYP58557 167 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-208ENST00000504387 KIAA1024LP59773 190 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 SRSF11Q05519 484 aaKnown RBP7.24□□□□□ -1.25
NEDD9-208ENST00000504387 AANATQ16613 207 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms