RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 ABCE1P61221 599 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-209ENST00000503346 INPP5JQ15735 1006 aaPredicted RBP16.95■□□□□ 0.3
PDLIM7-209ENST00000503346 HHATQ5VTY9 493 aa16.95■□□□□ 0.3
PDLIM7-209ENST00000503346 RPUSD3Q6P087 351 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-209ENST00000503346 DDIASQ8IXT1 998 aa16.95■□□□□ 0.3
PDLIM7-209ENST00000503346 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.95■□□□□ 0.3
PDLIM7-209ENST00000503346 AGR3Q8TD06 166 aa16.95■□□□□ 0.3
PDLIM7-209ENST00000503346 FCRL1Q96LA6 429 aa16.95■□□□□ 0.3
PDLIM7-209ENST00000503346 CCT7Q99832 543 aa16.95■□□□□ 0.3
PDLIM7-209ENST00000503346 PAIP2Q9BPZ3 127 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-209ENST00000503346 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.95■□□□□ 0.3
PDLIM7-209ENST00000503346 TRIM45Q9H8W5 580 aaPredicted RBP16.95■□□□□ 0.3
PDLIM7-209ENST00000503346 EHD3Q9NZN3 535 aa16.95■□□□□ 0.3
PDLIM7-209ENST00000503346 COPS7AQ9UBW8 275 aa16.95■□□□□ 0.3
PDLIM7-209ENST00000503346 POLR3HQ9Y535 204 aaPredicted RBP16.95■□□□□ 0.3
PDLIM7-209ENST00000503346 J3QKU1 62 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 HRKO00198 91 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 FCHO1O14526 889 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 LSM1O15116 133 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 SEC22BO75396 215 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 LYPLA1O75608 230 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 CSNK2A2P19784 350 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 ALDH9A1P49189 494 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 ERVK-8P63133 956 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 RNF4P78317 190 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 ZNF267Q14586 743 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 NR6A1Q15406 480 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 ZNF750Q32MQ0 723 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 XKR7Q5GH72 579 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 MDS2Q8NDY4 140 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 OR5L2Q8NGL0 311 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 CPT1CQ8TCG5 803 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 THAP3Q8WTV1 239 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 KLHL29Q96CT2 875 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 ZNF681Q96N22 645 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 SH3GL2Q99962 352 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 TRIM4Q9C037 500 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 C20orf27Q9GZN8 174 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 ZNF395Q9H8N7 513 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 CXorf21Q9HAI6 301 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 MYNNQ9NPC7 610 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 NKIRAS1Q9NYS0 192 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 HAO1Q9UJM8 370 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 UTS2RQ9UKP6 389 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 ERVK-19Q9WJR5 959 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 TMED5Q9Y3A6 229 aa16.94■□□□□ 0.3
PDLIM7-209ENST00000503346 PRAMEF2O60811 474 aa16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 ERAL1O75616 437 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 ATP1B1P05026 303 aa16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 DDCP20711 480 aa16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 FEN1P39748 380 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 SLC1A6P48664 564 aa16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 FOXK1P85037 733 aa16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 STX3Q13277 289 aa16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 RFTN2Q52LD8 501 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 PRR30Q53SZ7 412 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 ZNF468Q5VIY5 522 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 FAM71E1Q6IPT2 247 aa16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 IKBIPQ70UQ0 350 aa16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 GALNT12Q8IXK2 581 aa16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 SAMD14Q8IZD0 417 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 SUN3Q8TAQ9 357 aa16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 NUBPLQ8TB37 319 aa16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 MIB2Q96AX9 1013 aa16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 SNRNP40Q96DI7 357 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 CNRIP1Q96F85 164 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 PPP3R2Q96LZ3 170 aa16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 SORT1Q99523 831 aa16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 CNPPD1Q9BV87 410 aa16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.93■□□□□ 0.37e-8■■■■■ 55
PDLIM7-209ENST00000503346 ANKRD10Q9NXR5 420 aa16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 MYOTQ9UBF9 498 aa16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 YARS2Q9Y2Z4 477 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 RAP2CQ9Y3L5 183 aa16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 PCDHGB6Q9Y5F9 930 aa16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 ZNF780BQ9Y6R6 833 aa16.93■□□□□ 0.3
PDLIM7-209ENST00000503346 ITGA10O75578 1167 aa16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 NEURL1O76050 574 aa16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 CLPSP04118 112 aa16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 NT5EP21589 574 aa16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 HLCSP50747 726 aa16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 HK2P52789 917 aa16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 OC90Q02509 493 aaPredicted RBP16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 C2orf80Q0P641 193 aa16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 BST1Q10588 318 aa16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 FUT7Q11130 342 aa16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 OR1C1Q15619 314 aa16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 CEBPEQ15744 281 aa16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 INAQ16352 499 aa16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 C9orf40Q8IXQ3 194 aa16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 KIRREL3Q8IZU9 778 aa16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 LRRC25Q8N386 305 aaPredicted RBP16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 CISD2Q8N5K1 135 aaKnown RBP16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 HORMAD2Q8N7B1 307 aa16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 ZNF781Q8N8C0 355 aa16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 MGARPQ8TDB4 240 aa16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 DOK4Q8TEW6 326 aa16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 ATP6V1G3Q96LB4 118 aa16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 SIGLEC12Q96PQ1 595 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms