RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 WNT3P56703 355 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 ISL1P61371 349 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 SIM2Q14190 667 aaPredicted RBP7.04□□□□□ -1.28
PDGFC-203ENST00000502773 MAD2L1BPQ15013 274 aaPredicted RBP7.04□□□□□ -1.28
PDGFC-203ENST00000502773 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.04□□□□□ -1.28
PDGFC-203ENST00000502773 FAM122CQ6P4D5 195 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 FAM129CQ86XR2 697 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 RNF130Q86XS8 419 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 NAGSQ8N159 534 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 ADAMTS15Q8TE58 950 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 CCDC120Q96HB5 630 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 PINK1Q9BXM7 581 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 U3KQV3 271 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 A0A0U1RQS6 177 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 CENPBD1B2RD01 187 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 TFECO14948 347 aaPredicted RBP7.04□□□□□ -1.28
PDGFC-203ENST00000502773 CHST10O43529 356 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 MT-ND1P03886 318 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 ACP5P13686 325 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 SLC6A11P48066 632 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 LSM3P62310 102 aaKnown RBP7.04□□□□□ -1.28
PDGFC-203ENST00000502773 ALDH6A1Q02252 535 aaKnown RBP7.04□□□□□ -1.28
PDGFC-203ENST00000502773 ST3GAL3Q11203 375 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 ZNHIT3Q15649 155 aaPredicted RBP7.04□□□□□ -1.28
PDGFC-203ENST00000502773 TBCEQ15813 527 aaPredicted RBP7.04□□□□□ -1.28
PDGFC-203ENST00000502773 GTDC1Q4AE62 458 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 FGD3Q5JSP0 725 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 CATSPEREQ5SY80 951 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 SAXO2Q658L1 398 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 CORO6Q6QEF8 472 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 CLECL1Q8IZS7 167 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 OR8J1Q8NGP2 316 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 OR8K3Q8NH51 312 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 VANGL1Q8TAA9 524 aaPredicted RBP7.04□□□□□ -1.28
PDGFC-203ENST00000502773 DNASE1L2Q92874 299 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 ZNF354BQ96LW1 612 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 OR4K3Q96R72 315 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 PELOQ9BRX2 385 aaKnown RBP7.04□□□□□ -1.28
PDGFC-203ENST00000502773 DUSP21Q9H596 190 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 BCL2L10Q9HD36 194 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 ZCCHC3Q9NUD5 404 aaKnown RBP7.04□□□□□ -1.28
PDGFC-203ENST00000502773 ADAM30Q9UKF2 790 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 UTS2RQ9UKP6 389 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 EDARQ9UNE0 448 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 PLCL2Q9UPR0 1127 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 SLC17A4Q9Y2C5 497 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 PCDHGA8Q9Y5G5 932 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 HYKKA2RU49 373 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 ISPDA4D126 451 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 CLCA1A8K7I4 914 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 MID1O15344 667 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 OR10H3O60404 316 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 SCN2BO60939 215 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 VIPP01282 170 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 CA3P07451 260 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 PSMD4P55036 377 aaKnown RBP7.04□□□□□ -1.28
PDGFC-203ENST00000502773 TAS2R38P59533 333 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 MEP1AQ16819 746 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 WSCD2Q2TBF2 565 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 ARMC4Q5T2S8 1044 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 PIP5KL1Q5T9C9 394 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 FAM83HQ6ZRV2 1179 aaPredicted RBP7.04□□□□□ -1.28
PDGFC-203ENST00000502773 TEX47Q8TBZ9 253 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 EGLN2Q96KS0 407 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 SERINC2Q96SA4 455 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 TMEM246Q9BRR3 403 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 SARGQ9BW04 601 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 BTBD1Q9H0C5 482 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 TP63Q9H3D4 680 aaPredicted RBP7.04□□□□□ -1.28
PDGFC-203ENST00000502773 IGFLR1Q9H665 355 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 ENPP5Q9UJA9 477 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 POLHQ9Y253 713 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 CFL2Q9Y281 166 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 BTBD3Q9Y2F9 522 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 GSTK1Q9Y2Q3 226 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 MRPS17Q9Y2R5 130 aaKnown RBP7.04□□□□□ -1.28
PDGFC-203ENST00000502773 ANAPC1Q9H1A4 1944 aa7.03□□□□□ -1.28
PDGFC-203ENST00000502773 PLXNA4Q9HCM2 1894 aa7.03□□□□□ -1.28
PDGFC-203ENST00000502773 A0A1W2PQU0 124 aa7.03□□□□□ -1.28
PDGFC-203ENST00000502773 PRRT4C9JH25 899 aa7.03□□□□□ -1.28
PDGFC-203ENST00000502773 MAN2B1O00754 1011 aa7.03□□□□□ -1.28
PDGFC-203ENST00000502773 ALPPP05187 535 aa7.03□□□□□ -1.28
PDGFC-203ENST00000502773 HOXB2P14652 356 aa7.03□□□□□ -1.28
PDGFC-203ENST00000502773 MATN1P21941 496 aa7.03□□□□□ -1.28
PDGFC-203ENST00000502773 UGT2B10P36537 528 aa7.03□□□□□ -1.28
PDGFC-203ENST00000502773 RABIFP47224 123 aa7.03□□□□□ -1.28
PDGFC-203ENST00000502773 NCBP2P52298 156 aaKnown RBP eCLIP7.03□□□□□ -1.28
PDGFC-203ENST00000502773 SMSP52788 366 aa7.03□□□□□ -1.28
PDGFC-203ENST00000502773 PMS2P3Q13401 168 aa7.03□□□□□ -1.28
PDGFC-203ENST00000502773 SYT6Q5T7P8 510 aaPredicted RBP7.03□□□□□ -1.28
PDGFC-203ENST00000502773 FOXB2Q5VYV0 432 aa7.03□□□□□ -1.28
PDGFC-203ENST00000502773 SIGIRRQ6IA17 410 aa7.03□□□□□ -1.28
PDGFC-203ENST00000502773 RANBP3LQ86VV4 465 aaPredicted RBP7.03□□□□□ -1.28
PDGFC-203ENST00000502773 IL17RCQ8NAC3 791 aa7.03□□□□□ -1.28
PDGFC-203ENST00000502773 GNPDA2Q8TDQ7 276 aa7.03□□□□□ -1.28
PDGFC-203ENST00000502773 KLHL6Q8WZ60 621 aa7.03□□□□□ -1.28
PDGFC-203ENST00000502773 EXOSC8Q96B26 276 aaKnown RBP7.03□□□□□ -1.28
PDGFC-203ENST00000502773 C11orf24Q96F05 449 aaPredicted RBP7.03□□□□□ -1.28
PDGFC-203ENST00000502773 SLC6A16Q9GZN6 736 aa7.03□□□□□ -1.28
PDGFC-203ENST00000502773 C6orf62Q9GZU0 229 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms