RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 NKAIN2Q5VXU1 208 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 SHQ1Q6PI26 577 aaKnown RBP12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 SLC44A2Q8IWA5 706 aaPredicted RBP12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 SLC30A8Q8IWU4 369 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 TMEM52Q8NDY8 209 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 SFXN5Q8TD22 340 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 CYGBQ8WWM9 190 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 OTUB1Q96FW1 271 aaPredicted RBP12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 C16orf58Q96GQ5 468 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 GIMAP4Q9NUV9 329 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 MS4A12Q9NXJ0 267 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 USE1Q9NZ43 259 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 NDUFAF4Q9P032 175 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 MYO15AQ9UKN7 3530 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 MDC1Q14676 2089 aaKnown RBP12.87□□□□□ -0.35
SPTBN1-205ENST00000496323 A0A1B0GTW7 788 aa12.87□□□□□ -0.35
SPTBN1-205ENST00000496323 SGK494L7N484 410 aa12.87□□□□□ -0.35
SPTBN1-205ENST00000496323 MED26O95402 600 aa12.87□□□□□ -0.35
SPTBN1-205ENST00000496323 RECKO95980 971 aa12.87□□□□□ -0.35
SPTBN1-205ENST00000496323 HMGN2P05204 90 aaKnown RBP12.87□□□□□ -0.35
SPTBN1-205ENST00000496323 MATN1P21941 496 aa12.87□□□□□ -0.35
SPTBN1-205ENST00000496323 MYF6P23409 242 aa12.87□□□□□ -0.35
SPTBN1-205ENST00000496323 SOX18P35713 384 aa12.87□□□□□ -0.35
SPTBN1-205ENST00000496323 CAPGP40121 348 aa12.87□□□□□ -0.35
SPTBN1-205ENST00000496323 CTSKP43235 329 aa12.87□□□□□ -0.35
SPTBN1-205ENST00000496323 OR1E2P47887 323 aa12.87□□□□□ -0.35
SPTBN1-205ENST00000496323 CLCN2P51788 898 aa12.87□□□□□ -0.35
SPTBN1-205ENST00000496323 XKP51811 444 aa12.87□□□□□ -0.35
SPTBN1-205ENST00000496323 ITGA1P56199 1179 aa12.87□□□□□ -0.35
SPTBN1-205ENST00000496323 DUSP7Q16829 419 aa12.87□□□□□ -0.35
SPTBN1-205ENST00000496323 ZIK1Q3SY52 487 aaPredicted RBP12.87□□□□□ -0.35
SPTBN1-205ENST00000496323 CA13Q8N1Q1 262 aa12.87□□□□□ -0.35
SPTBN1-205ENST00000496323 DHRSXQ8N5I4 330 aa12.87□□□□□ -0.35
SPTBN1-205ENST00000496323 SPPL2AQ8TCT8 520 aa12.87□□□□□ -0.35
SPTBN1-205ENST00000496323 KAT2AQ92830 837 aa12.87□□□□□ -0.35
SPTBN1-205ENST00000496323 SDCCAG3Q96C92 435 aa12.87□□□□□ -0.35
SPTBN1-205ENST00000496323 YIPF4Q9BSR8 244 aa12.87□□□□□ -0.35
SPTBN1-205ENST00000496323 ERVMER34-1Q9H9K5 563 aa12.87□□□□□ -0.35
SPTBN1-205ENST00000496323 FAM227AF5H4B4 570 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 DPM1O60762 260 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 NME6O75414 186 aaPredicted RBP12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 FHP07954 510 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 SMIM18P0DKX4 95 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 THRBP10828 461 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 TLX1P31314 330 aaPredicted RBP12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 GABRA4P48169 554 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 LASP1Q14847 261 aaKnown RBP12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 SYPL1Q16563 259 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 IFI44LQ53G44 452 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 ZC3H12BQ5HYM0 836 aaKnown RBP12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 USP51Q70EK9 711 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 PATL1Q86TB9 770 aaKnown RBP12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 HIPK1Q86Z02 1210 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 LRRC25Q8N386 305 aaPredicted RBP12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 OR4K14Q8NGD5 310 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 XAGE5Q8WWM1 108 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 TCTN2Q96GX1 697 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 TGM7Q96PF1 710 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 RBM4BQ9BQ04 359 aaKnown RBP12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 RBM4Q9BWF3 364 aaKnown RBP12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 ZNF696Q9H7X3 374 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 PRDM9Q9NQV7 894 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 PRMT8Q9NR22 394 aaPredicted RBP12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 LRIT1Q9P2V4 623 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 TMEFF2Q9UIK5 374 aaPredicted RBP12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 BAG5Q9UL15 447 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 IGHV5-51A0A0C4DH38 117 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 RHPN2P1A8MT19 583 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 C5orf58C9J3I9 102 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 EMC8O43402 210 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 IFNA14P01570 189 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 ALDH4A1P30038 563 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 SHC2P98077 582 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 ID2Q02363 134 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 FUT5Q11128 374 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 C6orf132Q5T0Z8 1188 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 LYSMD4Q5XG99 296 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 USP53Q70EK8 1073 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 SLC35F3Q8IY50 421 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 OR7G2Q8NG99 324 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 OR56A1Q8NGH5 318 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 OR9A4Q8NGU2 314 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 MIPOL1Q8TD10 442 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 LZICQ8WZA0 190 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 GIMAP5Q96F15 307 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 MBOAT4Q96T53 435 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 TREX2Q9BQ50 279 aaPredicted RBP12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 TOR3AQ9H497 397 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 RUBCNLQ9H714 662 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 TRPC4Q9UBN4 977 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 KCNE3Q9Y6H6 103 aa12.86□□□□□ -0.35
SPTBN1-205ENST00000496323 H0YAE9 185 aa12.85□□□□□ -0.35
SPTBN1-205ENST00000496323 SRPX2O60687 465 aaPredicted RBP12.85□□□□□ -0.35
SPTBN1-205ENST00000496323 MFN2O95140 757 aa12.85□□□□□ -0.35
SPTBN1-205ENST00000496323 TNFAIP8O95379 198 aa12.85□□□□□ -0.35
SPTBN1-205ENST00000496323 MYF5P13349 255 aa12.85□□□□□ -0.35
SPTBN1-205ENST00000496323 CD247P20963 164 aa12.85□□□□□ -0.35
SPTBN1-205ENST00000496323 DNAJA1P31689 397 aaKnown RBP12.85□□□□□ -0.35
SPTBN1-205ENST00000496323 DHPSP49366 369 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms