RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 CLN6Q9NWW5 311 aa14.53□□□□□ -0.08
CALD1-222ENST00000495522 CNOT2Q9NZN8 540 aaKnown RBP14.53□□□□□ -0.08
CALD1-222ENST00000495522 SLC6A14Q9UN76 642 aa14.53□□□□□ -0.08
CALD1-222ENST00000495522 MGAT4BQ9UQ53 548 aa14.53□□□□□ -0.08
CALD1-222ENST00000495522 ATG2AQ2TAZ0 1938 aa14.53□□□□□ -0.08
CALD1-222ENST00000495522 CCDC88CQ9P219 2028 aa14.52□□□□□ -0.08
CALD1-222ENST00000495522 TRANK1O15050 2925 aa14.52□□□□□ -0.08
CALD1-222ENST00000495522 PPM1DO15297 605 aa14.52□□□□□ -0.08
CALD1-222ENST00000495522 KCNJ13O60928 360 aa14.52□□□□□ -0.08
CALD1-222ENST00000495522 CEACAM5P06731 702 aa14.52□□□□□ -0.08
CALD1-222ENST00000495522 H1F0P07305 194 aaKnown RBP14.52□□□□□ -0.08
CALD1-222ENST00000495522 OR12D1P0DN82 309 aa14.52□□□□□ -0.08
CALD1-222ENST00000495522 BMP4P12644 408 aa14.52□□□□□ -0.08
CALD1-222ENST00000495522 GADD45AP24522 165 aa14.52□□□□□ -0.08
CALD1-222ENST00000495522 POU1F1P28069 291 aa14.52□□□□□ -0.08
CALD1-222ENST00000495522 NTSP30990 170 aa14.52□□□□□ -0.08
CALD1-222ENST00000495522 CNR2P34972 360 aa14.52□□□□□ -0.08
CALD1-222ENST00000495522 BCL6P41182 706 aa14.52□□□□□ -0.08
CALD1-222ENST00000495522 OLR1P78380 273 aa14.52□□□□□ -0.08
CALD1-222ENST00000495522 ZIC1Q15915 447 aa14.52□□□□□ -0.08
CALD1-222ENST00000495522 SYPL1Q16563 259 aa14.52□□□□□ -0.08
CALD1-222ENST00000495522 ZNF776Q68DI1 518 aaPredicted RBP14.52□□□□□ -0.08
CALD1-222ENST00000495522 DEF8Q6ZN54 512 aa14.52□□□□□ -0.08
CALD1-222ENST00000495522 SZRD1Q7Z422 152 aa14.52□□□□□ -0.08
CALD1-222ENST00000495522 FAM46DQ8NEK8 389 aa14.52□□□□□ -0.08
CALD1-222ENST00000495522 C1QTNF2Q9BXJ5 285 aa14.52□□□□□ -0.08
CALD1-222ENST00000495522 MVB12BQ9H7P6 319 aa14.52□□□□□ -0.08
CALD1-222ENST00000495522 ZBTB20Q9HC78 741 aaPredicted RBP14.52□□□□□ -0.08
CALD1-222ENST00000495522 SLC35C2Q9NQQ7 365 aa14.52□□□□□ -0.08
CALD1-222ENST00000495522 CKAP5Q14008 2032 aa14.52□□□□□ -0.09
CALD1-222ENST00000495522 PRR23AA6NEV1 266 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 CNOT3O75175 753 aaKnown RBP14.51□□□□□ -0.09
CALD1-222ENST00000495522 SEMA7AO75326 666 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 PTHP01270 115 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 RPLP0P05388 317 aaKnown RBP14.51□□□□□ -0.09
CALD1-222ENST00000495522 OSMP13725 252 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 PPP2R1BP30154 601 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 NCBP2P52298 156 aaKnown RBP eCLIP14.51□□□□□ -0.09
CALD1-222ENST00000495522 SMIM11AP58511 58 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 SLC9A5Q14940 896 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 SEC23BQ15437 767 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 NIPAL1Q6NVV3 410 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 USP43Q70EL4 1123 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 ZNF367Q7RTV3 350 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 KRT73Q86Y46 540 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 VANGL1Q8TAA9 524 aaPredicted RBP14.51□□□□□ -0.09
CALD1-222ENST00000495522 GANCQ8TET4 914 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 BBS4Q96RK4 519 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 KXD1Q9BQD3 176 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 KLHL31Q9H511 634 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 SEMA3GQ9NS98 782 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 ZCCHC3Q9NUD5 404 aaKnown RBP14.51□□□□□ -0.09
CALD1-222ENST00000495522 TRPC4Q9UBN4 977 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 ACAD8Q9UKU7 415 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 SLC17A4Q9Y2C5 497 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 PLEKHM1Q9Y4G2 1056 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 GPC6Q9Y625 555 aaPredicted RBP14.51□□□□□ -0.09
CALD1-222ENST00000495522 PRAMEF27A3QJZ7 478 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 PDZK1P1A8MUH7 402 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 MAN2B1O00754 1011 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 OR10H3O60404 316 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 NR2F1P10589 423 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 KHKP50053 298 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 UGT2B15P54855 530 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 ABATP80404 500 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 ILKQ13418 452 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 TRIM16LQ309B1 348 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 ARMCX4Q5H9R4 360 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 MFSD4BQ5TF39 518 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 OR52E1Q8NGJ3 308 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 OR5D16Q8NGK9 328 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 MCFD2Q8NI22 146 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 XAGE5Q8WWM1 108 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 CDCA4Q9BXL8 241 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 REV1Q9UBZ9 1251 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 DAPK2Q9UIK4 370 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 MOSPD1Q9UJG1 213 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 GPSM3Q9Y4H4 160 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 DOCK9Q9BZ29 2069 aa14.51□□□□□ -0.09
CALD1-222ENST00000495522 A0A1W2PQU0 124 aa14.5□□□□□ -0.09
CALD1-222ENST00000495522 FUOMA2VDF0 154 aa14.5□□□□□ -0.09
CALD1-222ENST00000495522 PRR19A6NJB7 356 aa14.5□□□□□ -0.09
CALD1-222ENST00000495522 OR52A4PA6NMU1 304 aa14.5□□□□□ -0.09
CALD1-222ENST00000495522 TLR4O00206 839 aa14.5□□□□□ -0.09
CALD1-222ENST00000495522 HAT1O14929 419 aa14.5□□□□□ -0.09
CALD1-222ENST00000495522 ERI3O43414 337 aaKnown RBP14.5□□□□□ -0.09
CALD1-222ENST00000495522 CD72P21854 359 aa14.5□□□□□ -0.09
CALD1-222ENST00000495522 GDI1P31150 447 aa14.5□□□□□ -0.09
CALD1-222ENST00000495522 SLAMF1Q13291 335 aa14.5□□□□□ -0.09
CALD1-222ENST00000495522 UAP1L1Q3KQV9 507 aa14.5□□□□□ -0.09
CALD1-222ENST00000495522 ITPRIPL2Q3MIP1 535 aa14.5□□□□□ -0.09
CALD1-222ENST00000495522 LEXMQ3ZCV2 418 aa14.5□□□□□ -0.09
CALD1-222ENST00000495522 RBM45Q8IUH3 476 aaKnown RBP14.5□□□□□ -0.09
CALD1-222ENST00000495522 FAM20CQ8IXL6 584 aa14.5□□□□□ -0.09
CALD1-222ENST00000495522 TBC1D19Q8N5T2 526 aa14.5□□□□□ -0.09
CALD1-222ENST00000495522 OR4D11Q8NGI4 311 aa14.5□□□□□ -0.09
CALD1-222ENST00000495522 MS4A6EQ96DS6 147 aa14.5□□□□□ -0.09
CALD1-222ENST00000495522 MROQ9BYG7 248 aa14.5□□□□□ -0.09
CALD1-222ENST00000495522 SLC17A9Q9BYT1 436 aa14.5□□□□□ -0.09
CALD1-222ENST00000495522 DSN1Q9H410 356 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms