RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 RFPL4AA6NLU0 287 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 RFPL4AL1F8VTS6 287 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 FXYD1O00168 92 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 CA12O43570 354 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 CYTIPO60759 359 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 RECKO95980 971 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 HOXB8P17481 243 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-205ENST00000493587 HRH2P25021 359 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 CCR7P32248 378 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 ZNF143P52747 638 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-205ENST00000493587 ZNF460Q14592 562 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 FNDC3BQ53EP0 1204 aaKnown RBP6.55□□□□□ -1.36
VPS13B-205ENST00000493587 SPANXN3Q5MJ09 141 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 GPAT2Q6NUI2 795 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 H3F3CQ6NXT2 135 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 COMTD1Q86VU5 262 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 ARRDC1Q8N5I2 433 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 PXT1Q8NFP0 134 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 ING5Q8WYH8 240 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 TPD52L3Q96J77 140 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 DUSP26Q9BV47 211 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 LRRC3Q9BY71 257 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 SAP130Q9H0E3 1048 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 SDCBP2Q9H190 292 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 CHRDQ9H2X0 955 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 MINDY3Q9H8M7 445 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 GORASP2Q9H8Y8 452 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 TREM1Q9NP99 234 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 SEMA3GQ9NS98 782 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 HECAQ9UBI9 543 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-205ENST00000493587 LEF1Q9UJU2 399 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-205ENST00000493587 UTS2RQ9UKP6 389 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 SLC22A14Q9Y267 594 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-205ENST00000493587 H7C1Q1 480 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 ARVCFO00192 962 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 FOXE1O00358 373 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-205ENST00000493587 PPM1DO15297 605 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 SLC7A4O43246 635 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 SMPD2O60906 423 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 DIRAS1O95057 198 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 HMGCRP04035 888 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 AP1S1P61966 158 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 CSHL1Q14406 222 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 SNRNP35Q16560 246 aaKnown RBP6.55□□□□□ -1.36
VPS13B-205ENST00000493587 NTRK2Q16620 822 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 GUCA2BQ16661 112 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 INO80DQ53TQ3 878 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-205ENST00000493587 SH3PXD2AQ5TCZ1 1133 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 DENND6AQ8IWF6 608 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 CPXCR1Q8N123 301 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 THEM5Q8N1Q8 247 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 DCBLD1Q8N8Z6 715 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 DUSP18Q8NEJ0 188 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 OR2T12Q8NG77 320 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 HUS1BQ8NHY5 278 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 STOML3Q8TAV4 291 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 RXFP2Q8WXD0 754 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 ZNF516Q92618 1163 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 PIGKQ92643 395 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 LINGO1Q96FE5 620 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 SCMH1Q96GD3 660 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 TCF25Q9BQ70 676 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 MRPL37Q9BZE1 423 aaKnown RBP6.55□□□□□ -1.36
VPS13B-205ENST00000493587 SIK2Q9H0K1 926 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 DPAGT1Q9H3H5 408 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 AKTIPQ9H8T0 292 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 TCF7L1Q9HCS4 588 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 C19orf12Q9NSK7 152 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 GPATCH2LQ9NWQ4 482 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 EPHA6Q9UF33 1036 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 BTRCQ9Y297 605 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 KLK4Q9Y5K2 254 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 TRIP12Q14669 1992 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-205ENST00000493587 SCN10AQ9Y5Y9 1956 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 PTPRJQ12913 1337 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 RECQL4O94761 1208 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 ATXN1LP0C7T5 689 aaKnown RBP6.54□□□□□ -1.36
VPS13B-205ENST00000493587 MUC1P15941 1255 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-205ENST00000493587 ITGA3P26006 1051 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 PAX6P26367 422 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 HTR1EP28566 365 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 SOX3P41225 446 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 MAP3K8P41279 467 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 CAMK2DQ13557 499 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 RBM39Q14498 530 aaKnown RBP6.54□□□□□ -1.36
VPS13B-205ENST00000493587 MXD4Q14582 209 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-205ENST00000493587 RSU1Q15404 277 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 MPPED2Q15777 294 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 DUOXA2Q1HG44 320 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 KRBOX4Q5JUW0 171 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 LIPKQ5VXJ0 399 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 C9orf131Q5VYM1 1079 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 CD276Q5ZPR3 534 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 TAF8Q7Z7C8 310 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 TMEM179BQ7Z7N9 219 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 SLC41A1Q8IVJ1 513 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 RYBPQ8N488 228 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-205ENST00000493587 POMGNT2Q8NAT1 580 aa6.54□□□□□ -1.36
VPS13B-205ENST00000493587 CPEB3Q8NE35 698 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms