RNA–Protein interactions for RNA: ENST00000492464.1

MMP11-212, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-212ENST00000492464 SH3BP4Q9P0V3 963 aa13.21□□□□□ -0.29
MMP11-212ENST00000492464 KCNMB2Q9Y691 235 aa13.21□□□□□ -0.29
MMP11-212ENST00000492464 PDPK1O15530 556 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 TBX19O60806 448 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 ITGB2P05107 769 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 NT5EP21589 574 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 GALNSP34059 522 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 PGDP52209 483 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 CLNS1AP54105 237 aaKnown RBP13.2□□□□□ -0.3
MMP11-212ENST00000492464 C21orf58P58505 322 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 STX1BP61266 288 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 CHAF1BQ13112 559 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 PDE7AQ13946 482 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 COL28A1Q2UY09 1125 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 BTBD16Q32M84 506 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 TMEM198Q66K66 360 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 CPZQ66K79 652 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 PLAG1Q6DJT9 500 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 ANKRD26P1Q6NSI1 321 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 FAM180BQ6P0A1 224 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 APLFQ8IW19 511 aaPredicted RBP13.2□□□□□ -0.3
MMP11-212ENST00000492464 KBTBD2Q8IY47 623 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 KRTCAP2Q8N6L1 136 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 RIT1Q92963 219 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 CNRIP1Q96F85 164 aaPredicted RBP13.2□□□□□ -0.3
MMP11-212ENST00000492464 CRELD1Q96HD1 420 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 ART5Q96L15 291 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 IMMP1LQ96LU5 166 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 ZBTB18Q99592 522 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 TMEM120AQ9BXJ8 343 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 BRINP2Q9C0B6 783 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 ATAD3AQ9NVI7 634 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 TAS2R7Q9NYW3 318 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 COPS7AQ9UBW8 275 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 ATP6V1HQ9UI12 483 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 G3BP2Q9UN86 482 aaKnown RBP13.2□□□□□ -0.3
MMP11-212ENST00000492464 TRIM33Q9UPN9 1127 aa13.2□□□□□ -0.3
MMP11-212ENST00000492464 EXO1Q9UQ84 846 aaKnown RBP13.2□□□□□ -0.3
MMP11-212ENST00000492464 ITPR1Q14643 2758 aa13.19□□□□□ -0.3
MMP11-212ENST00000492464 A0A1W2PS29 197 aa13.19□□□□□ -0.3
MMP11-212ENST00000492464 ATP1B1P05026 303 aa13.19□□□□□ -0.3
MMP11-212ENST00000492464 ITGA3P26006 1051 aa13.19□□□□□ -0.3
MMP11-212ENST00000492464 MPIP34949 423 aa13.19□□□□□ -0.3
MMP11-212ENST00000492464 ARFIP2P53365 341 aa13.19□□□□□ -0.3
MMP11-212ENST00000492464 NME5P56597 212 aa13.19□□□□□ -0.3
MMP11-212ENST00000492464 SLC26A5P58743 744 aa13.19□□□□□ -0.3
MMP11-212ENST00000492464 ZNF750Q32MQ0 723 aa13.19□□□□□ -0.3
MMP11-212ENST00000492464 CPTPQ5TA50 214 aa13.19□□□□□ -0.3
MMP11-212ENST00000492464 GALNT12Q8IXK2 581 aa13.19□□□□□ -0.3
MMP11-212ENST00000492464 MORN4Q8NDC4 146 aa13.19□□□□□ -0.3
MMP11-212ENST00000492464 B3GNT7Q8NFL0 401 aa13.19□□□□□ -0.3
MMP11-212ENST00000492464 OR7A2PQ8NGA2 310 aa13.19□□□□□ -0.3
MMP11-212ENST00000492464 ZFP28Q8NHY6 868 aa13.19□□□□□ -0.3
MMP11-212ENST00000492464 M1APQ8TC57 530 aa13.19□□□□□ -0.3
MMP11-212ENST00000492464 PPWD1Q96BP3 646 aaKnown RBP13.19□□□□□ -0.3
MMP11-212ENST00000492464 ZNF681Q96N22 645 aa13.19□□□□□ -0.3
MMP11-212ENST00000492464 OR8D2Q9GZM6 311 aa13.19□□□□□ -0.3
MMP11-212ENST00000492464 CXorf21Q9HAI6 301 aa13.19□□□□□ -0.3
MMP11-212ENST00000492464 KLHL14Q9P2G3 628 aa13.19□□□□□ -0.3
MMP11-212ENST00000492464 GPR45Q9Y5Y3 372 aa13.19□□□□□ -0.3
MMP11-212ENST00000492464 PIEZO2Q9H5I5 2752 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 GMNCA6NCL1 334 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 GABRR3A8MPY1 467 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 MYO1GB0I1T2 1018 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 MASP2O00187 686 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 SERPINA7P05543 415 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 CCL11P51671 97 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 NCBP2P52298 156 aaKnown RBP eCLIP13.18□□□□□ -0.3
MMP11-212ENST00000492464 SEC24CP53992 1094 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 SF3A3Q12874 501 aaKnown RBP eCLIP13.18□□□□□ -0.3
MMP11-212ENST00000492464 TBR1Q16650 682 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 SPRED3Q2MJR0 410 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 DPY19L1Q2PZI1 675 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 PGS1Q32NB8 556 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 PDCD4Q53EL6 469 aaKnown RBP13.18□□□□□ -0.3
MMP11-212ENST00000492464 ZNF385BQ569K4 471 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 CGB2Q6NT52 195 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 CPLX4Q7Z7G2 160 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 RIMKLAQ8IXN7 391 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 CCDC116Q8IYX3 515 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 MIER2Q8N344 545 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 GALNT16Q8N428 558 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 NATD1Q8N6N6 113 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 NFAM1Q8NET5 270 aaPredicted RBP13.18□□□□□ -0.3
MMP11-212ENST00000492464 SLC2A12Q8TD20 617 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 PTPMT1Q8WUK0 201 aaPredicted RBP13.18□□□□□ -0.3
MMP11-212ENST00000492464 EXTL1Q92935 676 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 NCLNQ969V3 563 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 CIDECQ96AQ7 238 aaPredicted RBP13.18□□□□□ -0.3
MMP11-212ENST00000492464 ZBED6CLQ96FA7 236 aaPredicted RBP13.18□□□□□ -0.3
MMP11-212ENST00000492464 VMP1Q96GC9 406 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 FBXL20Q96IG2 436 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 THOC3Q96J01 351 aaKnown RBP13.18□□□□□ -0.3
MMP11-212ENST00000492464 CNPPD1Q9BV87 410 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 FAM107BQ9H098 131 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 KCNK13Q9HB14 408 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 MMP25Q9NPA2 562 aa13.18□□□□□ -0.3
MMP11-212ENST00000492464 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.18□□□□□ -0.3
MMP11-212ENST00000492464 A6NL46 340 aa13.17□□□□□ -0.3
MMP11-212ENST00000492464 ANKRD28O15084 1053 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms