RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 LCTLQ6UWM7 567 aa21.56■■□□□ 1.04
USF3-203ENST00000491165 TTC29Q8NA56 475 aaPredicted RBP21.56■■□□□ 1.04
USF3-203ENST00000491165 S100ZQ8WXG8 99 aa21.56■■□□□ 1.04
USF3-203ENST00000491165 VMP1Q96GC9 406 aa21.56■■□□□ 1.04
USF3-203ENST00000491165 FCRL1Q96LA6 429 aa21.56■■□□□ 1.04
USF3-203ENST00000491165 OR2A14Q96R47 310 aa21.56■■□□□ 1.04
USF3-203ENST00000491165 UCK1Q9HA47 277 aa21.56■■□□□ 1.04
USF3-203ENST00000491165 AKIP1Q9NQ31 210 aa21.56■■□□□ 1.04
USF3-203ENST00000491165 PDP1Q9P0J1 537 aaPredicted RBP21.56■■□□□ 1.04
USF3-203ENST00000491165 KLHL20Q9Y2M5 609 aa21.56■■□□□ 1.04
USF3-203ENST00000491165 PIPSLA2A3N6 862 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 OR5K3A6NET4 321 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 LILRA5A6NI73 299 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 M0R3G1 203 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 PRMT3O60678 531 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 JRKO75564 520 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 GPX2P18283 190 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 KDELR2P33947 212 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 ZBTB8BQ8NAP8 495 aaPredicted RBP21.55■■□□□ 1.04
USF3-203ENST00000491165 CCDC74AQ96AQ1 378 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 YIPF6Q96EC8 236 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 ASPSCR1Q9BZE9 553 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 EVA1BQ9NVM1 165 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 KIF17Q9P2E2 1029 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 GSAPA4D1B5 854 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 MAGEB17A8MXT2 336 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 ISM1B1AKI9 464 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 KDM1AO60341 852 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 JUPP14923 745 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 CDH3P22223 829 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 LSSP48449 732 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 VLDLRP98155 873 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 MEF2AQ02078 507 aaPredicted RBP21.55■■□□□ 1.04
USF3-203ENST00000491165 CFHR1Q03591 330 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 UGT8Q16880 541 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 TRIM16LQ309B1 348 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 ZNF621Q6ZSS3 439 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 ASCL5Q7RTU5 278 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 VTCN1Q7Z7D3 282 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 TMPRSS11BQ86T26 416 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 TRIM73Q86UV7 250 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 P2RY8Q86VZ1 359 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 Q8N9G6 341 aaPredicted RBP21.55■■□□□ 1.04
USF3-203ENST00000491165 AVL9Q8NBF6 648 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 HSH2DQ96JZ2 352 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 CCNB1IP1Q9NPC3 277 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 AASSQ9UDR5 926 aa21.55■■□□□ 1.04
USF3-203ENST00000491165 NDRG4Q9ULP0 352 aaKnown RBP21.55■■□□□ 1.04
USF3-203ENST00000491165 SAMHD1Q9Y3Z3 626 aaKnown RBP21.55■■□□□ 1.04
USF3-203ENST00000491165 MDC1Q14676 2089 aaKnown RBP21.54■■□□□ 1.04
USF3-203ENST00000491165 CPED1A4D0V7 1026 aa21.54■■□□□ 1.04
USF3-203ENST00000491165 C4orf47A7E2U8 309 aa21.54■■□□□ 1.04
USF3-203ENST00000491165 DIRAS1O95057 198 aa21.54■■□□□ 1.04
USF3-203ENST00000491165 C1QCP02747 245 aa21.54■■□□□ 1.04
USF3-203ENST00000491165 CHIT1Q13231 466 aa21.54■■□□□ 1.04
USF3-203ENST00000491165 NR0B2Q15466 257 aa21.54■■□□□ 1.04
USF3-203ENST00000491165 ADPRMQ3LIE5 342 aa21.54■■□□□ 1.04
USF3-203ENST00000491165 SYT6Q5T7P8 510 aaPredicted RBP21.54■■□□□ 1.04
USF3-203ENST00000491165 KIAA1614Q5VZ46 1190 aa21.54■■□□□ 1.04
USF3-203ENST00000491165 CCDC81Q6ZN84 652 aa21.54■■□□□ 1.04
USF3-203ENST00000491165 CBLL1Q75N03 491 aa21.54■■□□□ 1.04
USF3-203ENST00000491165 EIF3MQ7L2H7 374 aaKnown RBP21.54■■□□□ 1.04
USF3-203ENST00000491165 GALNT10Q86SR1 603 aa21.54■■□□□ 1.04
USF3-203ENST00000491165 SVOPQ8N4V2 548 aa21.54■■□□□ 1.04
USF3-203ENST00000491165 OR2L3Q8NG85 312 aa21.54■■□□□ 1.04
USF3-203ENST00000491165 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.54■■□□□ 1.04
USF3-203ENST00000491165 TMEM9BQ9NQ34 198 aa21.54■■□□□ 1.04
USF3-203ENST00000491165 KRT84Q9NSB2 600 aa21.54■■□□□ 1.04
USF3-203ENST00000491165 FAM120CQ9NX05 1096 aaKnown RBP21.54■■□□□ 1.04
USF3-203ENST00000491165 ACTR10Q9NZ32 417 aa21.54■■□□□ 1.04
USF3-203ENST00000491165 PCDHGB2Q9Y5G2 931 aa21.54■■□□□ 1.04
USF3-203ENST00000491165 KCNE2Q9Y6J6 123 aa21.54■■□□□ 1.04
USF3-203ENST00000491165 COL5A1P20908 1838 aaPredicted RBP21.54■■□□□ 1.04
USF3-203ENST00000491165 GVINP1Q7Z2Y8 2422 aa21.54■■□□□ 1.04
USF3-203ENST00000491165 IGHV1OR21-1A0A087WYE8 117 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 LRP3O75074 770 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 FKBP9O95302 570 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 COX7A2P14406 83 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 UGT2B7P16662 529 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 CAPZBP47756 277 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 SERPINB10P48595 397 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 WNT3P56703 355 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 PRDX1Q06830 199 aaKnown RBP21.53■■□□□ 1.04
USF3-203ENST00000491165 CSTF3Q12996 717 aaKnown RBP21.53■■□□□ 1.04
USF3-203ENST00000491165 CBX3Q13185 183 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 SF1Q15637 639 aaKnown RBP21.53■■□□□ 1.04
USF3-203ENST00000491165 DGUOKQ16854 277 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 SLCO4C1Q6ZQN7 724 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 BTLAQ7Z6A9 289 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 TSPYL5Q86VY4 417 aaPredicted RBP21.53■■□□□ 1.04
USF3-203ENST00000491165 PTOV1Q86YD1 416 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 RNF175Q8N4F7 328 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 ZNF540Q8NDQ6 660 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 NDNFQ8TB73 568 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 SLC5A11Q8WWX8 675 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 SLC6A20Q9NP91 592 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 DAPK2Q9UIK4 370 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 PCDHB11Q9Y5F2 797 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 FAM221BA6H8Z2 402 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 PROB1E7EW31 1015 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms