RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 REEP4Q9H6H4 257 aa14.7□□□□□ -0.06
C9orf3-219ENST00000488186 MMP25Q9NPA2 562 aa14.7□□□□□ -0.06
C9orf3-219ENST00000488186 SLC35C2Q9NQQ7 365 aa14.7□□□□□ -0.06
C9orf3-219ENST00000488186 SH3BP4Q9P0V3 963 aa14.7□□□□□ -0.06
C9orf3-219ENST00000488186 COPS7AQ9UBW8 275 aa14.7□□□□□ -0.06
C9orf3-219ENST00000488186 TEKT2Q9UIF3 430 aa14.7□□□□□ -0.06
C9orf3-219ENST00000488186 KALRNO60229 2985 aa14.7□□□□□ -0.06
C9orf3-219ENST00000488186 ITGAMP11215 1152 aa14.69□□□□□ -0.06
C9orf3-219ENST00000488186 NTSP30990 170 aa14.69□□□□□ -0.06
C9orf3-219ENST00000488186 MDH1P40925 334 aaKnown RBP14.69□□□□□ -0.06
C9orf3-219ENST00000488186 SOX8P57073 446 aa14.69□□□□□ -0.06
C9orf3-219ENST00000488186 Q0VFX4 171 aa14.69□□□□□ -0.06
C9orf3-219ENST00000488186 ZNF267Q14586 743 aaPredicted RBP14.69□□□□□ -0.06
C9orf3-219ENST00000488186 ZNF750Q32MQ0 723 aa14.69□□□□□ -0.06
C9orf3-219ENST00000488186 SLC9B1Q4ZJI4 515 aa14.69□□□□□ -0.06
C9orf3-219ENST00000488186 FAM180BQ6P0A1 224 aa14.69□□□□□ -0.06
C9orf3-219ENST00000488186 LARP4Q71RC2 724 aaKnown RBP eCLIP14.69□□□□□ -0.06
C9orf3-219ENST00000488186 CCDC116Q8IYX3 515 aa14.69□□□□□ -0.06
C9orf3-219ENST00000488186 LRRC25Q8N386 305 aaPredicted RBP14.69□□□□□ -0.06
C9orf3-219ENST00000488186 FDCSPQ8NFU4 85 aa14.69□□□□□ -0.06
C9orf3-219ENST00000488186 CEP70Q8NHQ1 597 aa14.69□□□□□ -0.06
C9orf3-219ENST00000488186 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.69□□□□□ -0.06
C9orf3-219ENST00000488186 BRIX1Q8TDN6 353 aaKnown RBP14.69□□□□□ -0.06
C9orf3-219ENST00000488186 PTPMT1Q8WUK0 201 aaPredicted RBP14.69□□□□□ -0.06
C9orf3-219ENST00000488186 NCLNQ969V3 563 aa14.69□□□□□ -0.06
C9orf3-219ENST00000488186 VMP1Q96GC9 406 aa14.69□□□□□ -0.06
C9orf3-219ENST00000488186 DEFB126Q9BYW3 111 aa14.69□□□□□ -0.06
C9orf3-219ENST00000488186 BRINP2Q9C0B6 783 aa14.69□□□□□ -0.06
C9orf3-219ENST00000488186 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.69□□□□□ -0.06
C9orf3-219ENST00000488186 PTGFRNQ9P2B2 879 aa14.69□□□□□ -0.06
C9orf3-219ENST00000488186 MAPRE3Q9UPY8 281 aa14.69□□□□□ -0.06
C9orf3-219ENST00000488186 CLDN16Q9Y5I7 305 aa14.69□□□□□ -0.06
C9orf3-219ENST00000488186 SMG1Q96Q15 3661 aaKnown RBP14.69□□□□□ -0.06
C9orf3-219ENST00000488186 TRBV11-1A0A0K0K1C0 115 aa14.68□□□□□ -0.06
C9orf3-219ENST00000488186 POLR3GO15318 223 aaPredicted RBP14.68□□□□□ -0.06
C9orf3-219ENST00000488186 EDF1O60869 148 aaKnown RBP14.68□□□□□ -0.06
C9orf3-219ENST00000488186 CELA2AP08217 269 aa14.68□□□□□ -0.06
C9orf3-219ENST00000488186 TROVE2P10155 538 aaKnown RBP eCLIP14.68□□□□□ -0.06
C9orf3-219ENST00000488186 G6PDP11413 515 aa14.68□□□□□ -0.06
C9orf3-219ENST00000488186 PCSK2P16519 638 aa14.68□□□□□ -0.06
C9orf3-219ENST00000488186 PRPS1L1P21108 318 aa14.68□□□□□ -0.06
C9orf3-219ENST00000488186 GALNSP34059 522 aa14.68□□□□□ -0.06
C9orf3-219ENST00000488186 AQP5P55064 265 aa14.68□□□□□ -0.06
C9orf3-219ENST00000488186 SOWAHCQ53LP3 525 aaPredicted RBP14.68□□□□□ -0.06
C9orf3-219ENST00000488186 EPGNQ6UW88 154 aa14.68□□□□□ -0.06
C9orf3-219ENST00000488186 GALNT12Q8IXK2 581 aa14.68□□□□□ -0.06
C9orf3-219ENST00000488186 SLC5A8Q8N695 610 aa14.68□□□□□ -0.06
C9orf3-219ENST00000488186 SIRT6Q8N6T7 355 aa14.68□□□□□ -0.06
C9orf3-219ENST00000488186 NFAM1Q8NET5 270 aaPredicted RBP14.68□□□□□ -0.06
C9orf3-219ENST00000488186 C9orf43Q8TAL5 461 aaPredicted RBP14.68□□□□□ -0.06
C9orf3-219ENST00000488186 SLC2A12Q8TD20 617 aa14.68□□□□□ -0.06
C9orf3-219ENST00000488186 ACTRT2Q8TDY3 377 aa14.68□□□□□ -0.06
C9orf3-219ENST00000488186 DOK4Q8TEW6 326 aa14.68□□□□□ -0.06
C9orf3-219ENST00000488186 MTERF3Q96E29 417 aa14.68□□□□□ -0.06
C9orf3-219ENST00000488186 ABHD17AQ96GS6 310 aa14.68□□□□□ -0.06
C9orf3-219ENST00000488186 SENP5Q96HI0 755 aaPredicted RBP14.68□□□□□ -0.06
C9orf3-219ENST00000488186 DPY30Q9C005 99 aa14.68□□□□□ -0.06
C9orf3-219ENST00000488186 ATAD3AQ9NVI7 634 aa14.68□□□□□ -0.06
C9orf3-219ENST00000488186 ASIC5Q9NY37 505 aa14.68□□□□□ -0.06
C9orf3-219ENST00000488186 ZNF451Q9Y4E5 1061 aa14.68□□□□□ -0.06
C9orf3-219ENST00000488186 ZFAND5O76080 213 aa14.67□□□□□ -0.06
C9orf3-219ENST00000488186 NCBP2P52298 156 aaKnown RBP eCLIP14.67□□□□□ -0.06
C9orf3-219ENST00000488186 DIO3P55073 304 aa14.67□□□□□ -0.06
C9orf3-219ENST00000488186 PTGR1Q14914 329 aa14.67□□□□□ -0.06
C9orf3-219ENST00000488186 CRB2Q5IJ48 1285 aa14.67□□□□□ -0.06
C9orf3-219ENST00000488186 CPTPQ5TA50 214 aa14.67□□□□□ -0.06
C9orf3-219ENST00000488186 ABHD17BQ5VST6 288 aa14.67□□□□□ -0.06
C9orf3-219ENST00000488186 OGFOD2Q6N063 350 aa14.67□□□□□ -0.06
C9orf3-219ENST00000488186 ANKRD26P1Q6NSI1 321 aa14.67□□□□□ -0.06
C9orf3-219ENST00000488186 HSDL2Q6YN16 418 aa14.67□□□□□ -0.06
C9orf3-219ENST00000488186 OR1N1Q8NGS0 311 aa14.67□□□□□ -0.06
C9orf3-219ENST00000488186 TM9SF4Q92544 642 aa14.67□□□□□ -0.06
C9orf3-219ENST00000488186 CNRIP1Q96F85 164 aaPredicted RBP14.67□□□□□ -0.06
C9orf3-219ENST00000488186 THOC1Q96FV9 657 aaKnown RBP14.67□□□□□ -0.06
C9orf3-219ENST00000488186 ZNF354BQ96LW1 612 aa14.67□□□□□ -0.06
C9orf3-219ENST00000488186 RILPQ96NA2 401 aa14.67□□□□□ -0.06
C9orf3-219ENST00000488186 ZBTB18Q99592 522 aa14.67□□□□□ -0.06
C9orf3-219ENST00000488186 EPS8L2Q9H6S3 715 aa14.67□□□□□ -0.06
C9orf3-219ENST00000488186 NPHS2Q9NP85 383 aa14.67□□□□□ -0.06
C9orf3-219ENST00000488186 TAS2R7Q9NYW3 318 aa14.67□□□□□ -0.06
C9orf3-219ENST00000488186 STMN3Q9NZ72 180 aa14.67□□□□□ -0.06
C9orf3-219ENST00000488186 ABI3Q9P2A4 366 aa14.67□□□□□ -0.06
C9orf3-219ENST00000488186 PCDHGB7Q9Y5F8 929 aa14.67□□□□□ -0.06
C9orf3-219ENST00000488186 PCDHGA9Q9Y5G4 932 aaKnown RBP14.67□□□□□ -0.06
C9orf3-219ENST00000488186 DOCK10Q96BY6 2186 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 A0A1W2PS29 197 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 GABRR3A8MPY1 467 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 ZNF195O14628 629 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 SCAMP2O15127 329 aaKnown RBP14.66□□□□□ -0.06
C9orf3-219ENST00000488186 UBDO15205 165 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 PDPK1O15530 556 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 CEACAM4O75871 244 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 GPC1P35052 558 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 IDH3AP50213 366 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 MANFP55145 182 aaKnown RBP14.66□□□□□ -0.06
C9orf3-219ENST00000488186 CLDN8P56748 225 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 PGS1Q32NB8 556 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 LACTB2Q53H82 288 aaPredicted RBP14.66□□□□□ -0.06
C9orf3-219ENST00000488186 TCTN3Q6NUS6 607 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 ISLR2Q6UXK2 745 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms